y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g008542m |
Family | GH14 |
Protein Properties | Length: 563 Molecular Weight: 63741 Isoelectric Point: 5.1854 |
Chromosome | Chromosome/Scaffold: 00001 Start: 1928831 End: 1934261 |
Description | beta-amylase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 114 | 531 | 0 |
YVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTPQVYNWSGYRRLFQIVRELELKLQVVMSFHECGGNVGDDVHIPLPQWVMEI GQNNPEIYFTDREGRRNSECLTWGIDKERVLRGRTAVEVYFDYMRSFRVEFNEFFVDGIIAEIEVGLGPCGELRYPTYPAKHGWKYPGIGEFQCYDKYLM KSLSKAAEARGHLFWARGPGNAGSYNSTPHETGFFRDGGEYDSYYGRFFLNWYSQVLIDHGDRVFALANLAFEGTCISAKLSGIHWWYKTASHAAELTAG FYNPSNRDGYAPIAAMLKKHGVALNFTCVELRTVDQHEDFPEALADPEGLVWQVLNAAWDVSILVASENALPCYDREGYNKILENAKPLNDPDGRHLSAF TYLRLSPVLTDGHNFIEF |
Full Sequence |
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Protein Sequence Length: 563 Download |
MAISSTQFCD ILRAPGASSP ITSSLSHKQT LFTSQRVPVT FHSLTYCNVT YCNACRFKRT 60 QFRTLAAIGE WEEETEDDPH GGDSVDAADD MKAVHLPPKL PERDFAGTPY VPVYVMLPLG 120 IIDMNCELVD PEILVNQLKI LKSINVDGVM VDCWWGIVEA HTPQVYNWSG YRRLFQIVRE 180 LELKLQVVMS FHECGGNVGD DVHIPLPQWV MEIGQNNPEI YFTDREGRRN SECLTWGIDK 240 ERVLRGRTAV EVYFDYMRSF RVEFNEFFVD GIIAEIEVGL GPCGELRYPT YPAKHGWKYP 300 GIGEFQCYDK YLMKSLSKAA EARGHLFWAR GPGNAGSYNS TPHETGFFRD GGEYDSYYGR 360 FFLNWYSQVL IDHGDRVFAL ANLAFEGTCI SAKLSGIHWW YKTASHAAEL TAGFYNPSNR 420 DGYAPIAAML KKHGVALNFT CVELRTVDQH EDFPEALADP EGLVWQVLNA AWDVSILVAS 480 ENALPCYDRE GYNKILENAK PLNDPDGRHL SAFTYLRLSP VLTDGHNFIE FERFVKRMHG 540 EAVPDLRVYT TEGNKEECSK NQ* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 3.0e-157 | 111 | 538 | 436 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 1.0e-175 | 111 | 545 | 443 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 13 | 548 | 555 | + beta-amylase | ||
PLN02705 | PLN02705 | 0 | 83 | 546 | 464 | + beta-amylase | ||
PLN02801 | PLN02801 | 0 | 110 | 562 | 462 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40370.1 | 0 | 73 | 550 | 78 | 550 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_191958.3 | 0 | 43 | 556 | 27 | 542 | BAM2 (BETA-AMYLASE 2); beta-amylase [Arabidopsis thaliana] |
RefSeq | XP_002274612.1 | 0 | 97 | 550 | 123 | 576 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002320794.1 | 0 | 104 | 540 | 1 | 437 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511858.1 | 0 | 1 | 541 | 1 | 534 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdp_A | 0 | 110 | 541 | 11 | 444 | A Chain A, Crystal Structure And Site-Directed Mutagenesis Of Bacillus Macerans Endo-1,3-1,4-Beta-Glucanase |
PDB | 1q6c_A | 0 | 110 | 541 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 110 | 541 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1byd_A | 0 | 110 | 541 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1byc_A | 0 | 110 | 541 | 11 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV466053 | 277 | 271 | 547 | 0 |
DV021150 | 292 | 196 | 487 | 0 |
CO447286 | 289 | 188 | 476 | 0 |
GR933701 | 264 | 197 | 460 | 0 |
GO367915 | 286 | 122 | 407 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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