y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.007G030600.1 |
Family | GH14 |
Protein Properties | Length: 540 Molecular Weight: 60739 Isoelectric Point: 8.9976 |
Chromosome | Chromosome/Scaffold: 07 Start: 2091121 End: 2093266 |
Description | chloroplast beta-amylase |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 82 | 496 | 0 |
YVMLPLDTVTHGGNLNKPKAMNASLMALKSAGVEGVMVDAWWGLVEKDGPLKYNWEGYFELVQMVEKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEE ISKNPDLVYTDRSGRRNPEYISLGCDSMPVLRGRTPIQAYTDYMRSFRERFRDYLGRVIVEIQVGMGPCGELRYPSYPESNGTWKFPGIGEFQCYDKFMR ASLEAAAAAMGKKDWGKSGPHDSGHYKQFPEETGFFQKDGTWNTEYGQFFLEWYSGMLLDHGDRLLSAAKGTFQGTGAKLSGKVAGIHWHYNTRSHAAEL TAGYYNTRHRDGYLPIARMFSKHGVVFNFTCMEMRDSQQPEHANCSPEGLVRQVKMVTKTARVELAGENALERYDSGAYAQVLATSRSDSGSGLSAFTYL RMNKRLFEGDNWRNL |
Full Sequence |
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Protein Sequence Length: 540 Download |
MALTLRSSTS FINLKETKSF KTSDDHFLAT VSFAQIKPSC RLRPKYSMSM QQVSHEKISE 60 KKEKLHSLMI SHTENNSKVP VYVMLPLDTV THGGNLNKPK AMNASLMALK SAGVEGVMVD 120 AWWGLVEKDG PLKYNWEGYF ELVQMVEKHG LKLQVVMSFH QCGGNVGDSC SIPLPPWVLE 180 EISKNPDLVY TDRSGRRNPE YISLGCDSMP VLRGRTPIQA YTDYMRSFRE RFRDYLGRVI 240 VEIQVGMGPC GELRYPSYPE SNGTWKFPGI GEFQCYDKFM RASLEAAAAA MGKKDWGKSG 300 PHDSGHYKQF PEETGFFQKD GTWNTEYGQF FLEWYSGMLL DHGDRLLSAA KGTFQGTGAK 360 LSGKVAGIHW HYNTRSHAAE LTAGYYNTRH RDGYLPIARM FSKHGVVFNF TCMEMRDSQQ 420 PEHANCSPEG LVRQVKMVTK TARVELAGEN ALERYDSGAY AQVLATSRSD SGSGLSAFTY 480 LRMNKRLFEG DNWRNLVEFV KNMSEGGRKI PDSDSRGTNL YIGFIRNKNV EKTKEAALA* 540 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 2.0e-145 | 49 | 503 | 462 | + beta-amylase | ||
pfam01373 | Glyco_hydro_14 | 1.0e-175 | 82 | 499 | 431 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
PLN02803 | PLN02803 | 0 | 1 | 539 | 549 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 73 | 506 | 440 | + beta-amylase; Provisional | ||
PLN02801 | PLN02801 | 0 | 79 | 517 | 447 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62440.1 | 0 | 1 | 539 | 1 | 543 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282871.1 | 0 | 1 | 539 | 1 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326690.1 | 0 | 1 | 539 | 1 | 547 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329547.1 | 0 | 1 | 539 | 1 | 548 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002517513.1 | 0 | 1 | 538 | 1 | 546 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdp_A | 0 | 79 | 503 | 12 | 441 | A Chain A, Peanut Peroxidase |
PDB | 1q6c_A | 0 | 79 | 503 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 79 | 503 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1uko_D | 0 | 79 | 503 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_C | 0 | 79 | 503 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BU103692 | 535 | 1 | 525 | 0 |
HO794833 | 413 | 117 | 527 | 0 |
HO781538 | 408 | 29 | 426 | 0 |
HO825836 | 382 | 153 | 532 | 0 |
ES830803 | 390 | 112 | 496 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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