y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g015809m |
Family | GH14 |
Protein Properties | Length: 401 Molecular Weight: 44242.7 Isoelectric Point: 6.008 |
Chromosome | Chromosome/Scaffold: 00011 Start: 1966482 End: 1968641 |
Description | beta-amylase 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 2 | 360 | 0 |
GKYNWSGYLAVAEMVEKIGLKLHVSLCFHALKQPKIPLPDWVSQIGESQSSIFYTDQSGQQFKGCLSLAVDDLPVLDGKTPIQVYQEFCESFKSSFKPFM GTTITGISMGLGPDGELRYPSHHRLAKSSKIPGVGEFQCCDRNMLNLLQQHAEANGNPLWGLRGPHDAPSYDESPNSNSFFKDNGGSWESPYGDFFLSWY SSQLISHGNCLLSLASSTFGETGVSIYGKIPLIHSWYKTRSHPSELTAGLYNTAKRDGYAAVAEMFAKNSCKMILPGMDLSDEHQPRESFSSPESLLAQI RTACNKHGVEVSGQNSSVTGAPGGFEQMKKNLFGENVVDLFTYQRMGAYFFSPEHFPSF |
Full Sequence |
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Protein Sequence Length: 401 Download |
MGKYNWSGYL AVAEMVEKIG LKLHVSLCFH ALKQPKIPLP DWVSQIGESQ SSIFYTDQSG 60 QQFKGCLSLA VDDLPVLDGK TPIQVYQEFC ESFKSSFKPF MGTTITGISM GLGPDGELRY 120 PSHHRLAKSS KIPGVGEFQC CDRNMLNLLQ QHAEANGNPL WGLRGPHDAP SYDESPNSNS 180 FFKDNGGSWE SPYGDFFLSW YSSQLISHGN CLLSLASSTF GETGVSIYGK IPLIHSWYKT 240 RSHPSELTAG LYNTAKRDGY AAVAEMFAKN SCKMILPGMD LSDEHQPRES FSSPESLLAQ 300 IRTACNKHGV EVSGQNSSVT GAPGGFEQMK KNLFGENVVD LFTYQRMGAY FFSPEHFPSF 360 TKFVRNLNQL ELHGDDLPVE EEVTESVHTN ANTNIQVQAA * 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 1.0e-79 | 3 | 375 | 387 | + beta-amylase | ||
PLN02801 | PLN02801 | 9.0e-85 | 2 | 375 | 389 | + beta-amylase | ||
PLN02161 | PLN02161 | 1.0e-93 | 4 | 368 | 378 | + beta-amylase | ||
PLN00197 | PLN00197 | 2.0e-98 | 2 | 388 | 400 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 1.0e-106 | 2 | 369 | 375 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD38148.1 | 0 | 1 | 400 | 52 | 450 | AF139501_1 beta-amylase [Prunus armeniaca] |
EMBL | CAI39245.1 | 0 | 1 | 400 | 137 | 536 | beta-amylase [Glycine max] |
EMBL | CAN66037.1 | 0 | 1 | 400 | 138 | 541 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002276777.1 | 0 | 1 | 400 | 138 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002516865.1 | 0 | 1 | 400 | 144 | 545 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fa2_A | 0 | 3 | 397 | 67 | 468 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
PDB | 1v3i_A | 0 | 3 | 375 | 66 | 444 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 1q6g_A | 0 | 3 | 375 | 66 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1wds_A | 0 | 3 | 375 | 66 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
PDB | 1wdp_A | 0 | 3 | 375 | 66 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO781436 | 402 | 1 | 401 | 0 |
HO796964 | 391 | 12 | 401 | 0 |
CB292432 | 276 | 1 | 276 | 0 |
EG631213 | 354 | 48 | 401 | 0 |
EY714643 | 302 | 36 | 333 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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