y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.005G208900.1 |
Family | GH14 |
Protein Properties | Length: 521 Molecular Weight: 58900.8 Isoelectric Point: 4.9734 |
Chromosome | Chromosome/Scaffold: 05 Start: 58959960 End: 58962967 |
Description | beta-amylase 6 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 23 | 442 | 0 |
YVMLPLGVISNDNVFEDQPKMEKQLKELRAAGVDGVMVDVWWGIVESKGPKQYDWSAYRSLFALVHECGLKLQAIMSFHRCGGNVGDEVTIPLPQWVLDI GETDPDIFYTNRKGNRNKEYLTIGVDNQPLFDGRTAVQLYSDYMKSFREHMSDFIEAGPIIDIEVGLGPAGELRYPSYTGTQGWVFPGIGEFQCYDKYLE AEFKEAATGAGHPEWGLPDNAGEYNDTPGSTEFFGLNGTYMTEKGKFFLTWYSNKLINHGDEILDEANRAFLGCKVKLAAKVAGIHWWYKSPSHAAELTS GYYNLKDRDGYRPIARMLSRHYAIFNFTCLEMRDSEQRADAKCGPQGLVQQVLSGGWREEVEVAGENALSRYDSNGYNQMLLNARPSGISREGLPKQIMY GVTYLRLSDELLKDKNFKIF |
Full Sequence |
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Protein Sequence Length: 521 Download |
MPEAPTAPST YNEKILANYV PVYVMLPLGV ISNDNVFEDQ PKMEKQLKEL RAAGVDGVMV 60 DVWWGIVESK GPKQYDWSAY RSLFALVHEC GLKLQAIMSF HRCGGNVGDE VTIPLPQWVL 120 DIGETDPDIF YTNRKGNRNK EYLTIGVDNQ PLFDGRTAVQ LYSDYMKSFR EHMSDFIEAG 180 PIIDIEVGLG PAGELRYPSY TGTQGWVFPG IGEFQCYDKY LEAEFKEAAT GAGHPEWGLP 240 DNAGEYNDTP GSTEFFGLNG TYMTEKGKFF LTWYSNKLIN HGDEILDEAN RAFLGCKVKL 300 AAKVAGIHWW YKSPSHAAEL TSGYYNLKDR DGYRPIARML SRHYAIFNFT CLEMRDSEQR 360 ADAKCGPQGL VQQVLSGGWR EEVEVAGENA LSRYDSNGYN QMLLNARPSG ISREGLPKQI 420 MYGVTYLRLS DELLKDKNFK IFKTFVKKMH ADQDYCADLG MYNHQIGPLE RSKPKLVMED 480 LLEATKPMEP FPWGEETDMK VDDFDGVLAN LIRKLFSLFK * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02705 | PLN02705 | 3.0e-122 | 19 | 452 | 436 | + beta-amylase | ||
PLN00197 | PLN00197 | 2.0e-149 | 20 | 454 | 439 | + beta-amylase; Provisional | ||
PLN02905 | PLN02905 | 2.0e-149 | 19 | 452 | 438 | + beta-amylase | ||
PLN02803 | PLN02803 | 2.0e-165 | 20 | 449 | 433 | + beta-amylase | ||
PLN02801 | PLN02801 | 0 | 5 | 520 | 517 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK30294.1 | 0 | 10 | 520 | 7 | 514 | AF353207_1 beta-amylase [Castanea crenata] |
EMBL | CAN70833.1 | 0 | 3 | 501 | 2 | 499 | hypothetical protein [Vitis vinifera] |
Swiss-Prot | O64407 | 0 | 9 | 502 | 2 | 495 | AMYB_VIGUN RecName: Full=Beta-amylase; AltName: Full=1,4-alpha-D-glucan maltohydrolase |
RefSeq | XP_002281003.1 | 0 | 3 | 501 | 2 | 499 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002327920.1 | 0 | 9 | 519 | 5 | 517 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uko_D | 0 | 9 | 502 | 1 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_C | 0 | 9 | 502 | 1 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_B | 0 | 9 | 502 | 1 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_A | 0 | 9 | 502 | 1 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_D | 0 | 9 | 502 | 1 | 494 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777976 | 493 | 11 | 502 | 0 |
HO803971 | 396 | 98 | 493 | 0 |
HO782669 | 385 | 115 | 499 | 0 |
GT625519 | 284 | 97 | 380 | 0 |
CV290805 | 309 | 141 | 449 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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