y
Basic Information | |
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Species | Citrus sinensis |
Cazyme ID | orange1.1g015723m |
Family | GH14 |
Protein Properties | Length: 403 Molecular Weight: 45834.9 Isoelectric Point: 5.2781 |
Chromosome | Chromosome/Scaffold: 00001 Start: 1928831 End: 1934261 |
Description | beta-amylase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 114 | 395 | 0 |
YVMLPLGIIDMNCELVDPEILVNQLKILKSINVDGVMVDCWWGIVEAHTPQVYNWSGYRRLFQIVRELELKLQVVMSFHECGGNVGDDVHIPLPQWVMEI GQNNPEIYFTDREGRRNSECLTWGIDKERVLRGRTAVEVYFDYMRSFRVEFNEFFVDGIIAEIEVGLGPCGELRYPTYPAKHGWKYPGIGEFQCYDKYLM KSLSKAAEARGHLFWARGPGNAGSYNSTPHETGFFRDGGEYDSYYGRFFLNWYSQVLIDHGDRVFALANLAFEGTCISAKVS |
Full Sequence |
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Protein Sequence Length: 403 Download |
MAISSTQFCD ILRAPGASSP ITSSLSHKQT LFTSQRVPVT FHSLTYCNVT YCNACRFKRT 60 QFRTLAAIGE WEEETEDDPH GGDSVDAADD MKAVHLPPKL PERDFAGTPY VPVYVMLPLG 120 IIDMNCELVD PEILVNQLKI LKSINVDGVM VDCWWGIVEA HTPQVYNWSG YRRLFQIVRE 180 LELKLQVVMS FHECGGNVGD DVHIPLPQWV MEIGQNNPEI YFTDREGRRN SECLTWGIDK 240 ERVLRGRTAV EVYFDYMRSF RVEFNEFFVD GIIAEIEVGL GPCGELRYPT YPAKHGWKYP 300 GIGEFQCYDK YLMKSLSKAA EARGHLFWAR GPGNAGSYNS TPHETGFFRD GGEYDSYYGR 360 FFLNWYSQVL IDHGDRVFAL ANLAFEGTCI SAKVSHQNFF FF* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 4.0e-107 | 111 | 395 | 290 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 1.0e-121 | 111 | 395 | 289 | + beta-amylase | ||
PLN02801 | PLN02801 | 7.0e-134 | 110 | 395 | 289 | + beta-amylase | ||
PLN02705 | PLN02705 | 5.0e-170 | 83 | 394 | 312 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 13 | 395 | 402 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI40368.1 | 0 | 60 | 401 | 169 | 510 | unnamed protein product [Vitis vinifera] |
EMBL | CBI40370.1 | 0 | 73 | 395 | 78 | 395 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274612.1 | 0 | 97 | 395 | 123 | 421 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002320794.1 | 0 | 104 | 401 | 1 | 298 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511858.1 | 0 | 1 | 401 | 1 | 394 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1q6g_A | 0 | 110 | 395 | 11 | 295 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1ukp_D | 0 | 110 | 395 | 11 | 295 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_C | 0 | 110 | 395 | 11 | 295 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_B | 0 | 110 | 395 | 11 | 295 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_A | 0 | 110 | 395 | 11 | 295 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG638376 | 267 | 119 | 385 | 0 |
DT587209 | 255 | 127 | 381 | 0 |
GO367915 | 280 | 122 | 401 | 0 |
JG814958 | 249 | 142 | 390 | 0 |
DT743760 | 240 | 119 | 358 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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