y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000288439 |
Family | AA3 |
Protein Properties | Length: 961 Molecular Weight: 105091 Isoelectric Point: 9.7782 |
Chromosome | Chromosome/Scaffold: 009738164 Start: 520 End: 5581 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 45 | 461 | 8.40779e-44 |
NQVSGKSFDYIIVGGGTAGCPLAATLSEKFSVLLVERGGSPYENPLIMENKNFGLSLVQTDEYTSVAQSFVSKDGGFQSPRKSSRRRIGYQRRIVSDAYK WVESRNAFKPKLTPWPYVAELSLLEAGIFPYNGFSLDHIEGTKIGATIYDEQGRRHXSADLLMAGNPNNITLLLNATVTSIIFHKKGNRNVTVVRGIRFI KSDGSSSQTHEAYLNTQNNSRSSTGDVILAAGALGSPQILLLSGIGPXKHLNKFDIPVAVNLKSVGKGMQDNPSIALVPXVADAKPKNFPPDSPKVIAIA DDFKLIVGSMILPISFNATIMLISGKLAFPESEGQLELNSTDPRKNPSVTFNYLATEKDMAECVKLGRLLEQIVRSKSIAYFLGVEGKRRNESMSTDDEL RKLCKNNVRTFYHYHGG | |||
AA3 | 474 | 954 | 0 |
QVSGKSFDYIIVGGGTAGCPLAATLSEKFSVLLVERDTRSYLDLSLFVSRVLSHLREKRRFTGKLGAMASSSGTGAGRVLGGGSAINGGFFSRASXDYVK RVGWNKEMVSDAYKWVESRNAFKPKLTPWQYVAELSFLEAGIFPYNGFSLDHIEGTKIGATTFDEQGRRHTSADLLTAGNPNXITLLLNATVTSIIFHEK GSRYETIVRGIRFIKSDGSSSQTHEAYLNTQNNSRSSTGDVILAAGALGSPQILLLSGIGPQKHLNKFNIPVAVNLKSVGKGMTDNPCIALLAEIADAKP KNFPPDSPKVTVIADDFKLVIQALILPXSFNATIMPIVGKLAFPESEGELELNSTDPRKNPSVTFNYLAKEKDMAECVKLGRLLEKIVRSKSIAYFLGIE GKRRNXSMSTDDELRKLCKNNVRTFYHYHGGCTMGSVVDKNYRVFGIXGLRVIDGSTFLESPGTNPMATLLMLGRYQGIKI |
Full Sequence |
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Protein Sequence Length: 961 Download |
MGXFIVSVPP VCSSGPVLFM DSRIYSDFFL MAGQTLPRKT TSDVNQVSGK SFDYIIVGGG 60 TAGCPLAATL SEKFSVLLVE RGGSPYENPL IMENKNFGLS LVQTDEYTSV AQSFVSKDGG 120 FQSPRKSSRR RIGYQRRIVS DAYKWVESRN AFKPKLTPWP YVAELSLLEA GIFPYNGFSL 180 DHIEGTKIGA TIYDEQGRRH XSADLLMAGN PNNITLLLNA TVTSIIFHKK GNRNVTVVRG 240 IRFIKSDGSS SQTHEAYLNT QNNSRSSTGD VILAAGALGS PQILLLSGIG PXKHLNKFDI 300 PVAVNLKSVG KGMQDNPSIA LVPXVADAKP KNFPPDSPKV IAIADDFKLI VGSMILPISF 360 NATIMLISGK LAFPESEGQL ELNSTDPRKN PSVTFNYLAT EKDMAECVKL GRLLEQIVRS 420 KSIAYFLGVE GKRRNESMST DDELRKLCKN NVRTFYHYHG GQTLPRKTTS DVNQVSGKSF 480 DYIIVGGGTA GCPLAATLSE KFSVLLVERD TRSYLDLSLF VSRVLSHLRE KRRFTGKLGA 540 MASSSGTGAG RVLGGGSAIN GGFFSRASXD YVKRVGWNKE MVSDAYKWVE SRNAFKPKLT 600 PWQYVAELSF LEAGIFPYNG FSLDHIEGTK IGATTFDEQG RRHTSADLLT AGNPNXITLL 660 LNATVTSIIF HEKGSRYETI VRGIRFIKSD GSSSQTHEAY LNTQNNSRSS TGDVILAAGA 720 LGSPQILLLS GIGPQKHLNK FNIPVAVNLK SVGKGMTDNP CIALLAEIAD AKPKNFPPDS 780 PKVTVIADDF KLVIQALILP XSFNATIMPI VGKLAFPESE GELELNSTDP RKNPSVTFNY 840 LAKEKDMAEC VKLGRLLEKI VRSKSIAYFL GIEGKRRNXS MSTDDELRKL CKNNVRTFYH 900 YHGGCTMGSV VDKNYRVFGI XGLRVIDGST FLESPGTNPM ATLLMLGRYQ GIKILQEREN 960 A 1020 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2303 | BetA | 3.0e-6 | 48 | 84 | 38 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
COG2303 | BetA | 1.0e-17 | 196 | 457 | 295 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
COG2303 | BetA | 1.0e-41 | 476 | 948 | 557 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 8.0e-100 | 29 | 461 | 506 | + Protein HOTHEAD | ||
PLN02785 | PLN02785 | 8.0e-138 | 463 | 958 | 564 | + Protein HOTHEAD |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002312249.1 | 0 | 469 | 957 | 2 | 486 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315047.1 | 0 | 33 | 464 | 1 | 439 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315047.1 | 0 | 461 | 957 | 1 | 489 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522448.1 | 0 | 30 | 471 | 29 | 481 | glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis] |
RefSeq | XP_002522448.1 | 0 | 461 | 960 | 32 | 527 | glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3red_L | 0 | 479 | 961 | 26 | 521 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_L | 0 | 51 | 461 | 26 | 464 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_K | 0 | 479 | 961 | 26 | 521 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_K | 0 | 51 | 461 | 26 | 464 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_J | 0 | 479 | 961 | 26 | 521 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO527356 | 212 | 579 | 790 | 0 |
GO527356 | 212 | 136 | 347 | 0 |
JZ191231 | 272 | 43 | 295 | 0 |
JZ191231 | 272 | 471 | 738 | 0 |
HO808060 | 252 | 709 | 958 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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