y
Basic Information | |
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Species | Oryza sativa |
Cazyme ID | LOC_Os06g44540.1 |
Family | AA3 |
Protein Properties | Length: 593 Molecular Weight: 63220.1 Isoelectric Point: 9.2507 |
Chromosome | Chromosome/Scaffold: 6 Start: 26904391 End: 26908175 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 49 | 587 | 0 |
TAAEEAYDYIVVGGGTAGCPLAATLAGPGGGRVLVLERGGAPAEFPPLATAGGFVRTLAMADPAPESDAPAQTFASEDGVPNVRARVLGGATSINAGFYS RAHPDWFRSHGEGGEAMNWDMKLVNSSYEWVERELAFQPVVRGWQAAVRAGLLEANVTPWNGFTMDHVSGTKVGATTFDSSGRRRSAADLLAFARPGRLR VAIRATVTRIIMSPIEPVARRGRSPQPAVAASGVVYQDRLLQQHHALLRPGGEVILSAGSLGSPQLLLLSGIGPANDLTSLGIPVFADVPDVGKHMFDNP RNGISIIPSIPIDHSLIQVVGIPSANGNESYLEAASYIVPLAPILRRGGPFSPSSPLYVTVVTIMEKVPGPLSEGSLWLTSSNPLESPSVRFNYLSRRED LARCVTGMRRVAKVLESTTMDVFRSAMGSLSQDSRRREFRIVGAALPVDWRTNDTALGDFCQQTVATLWHYHGGCVAGSVVDRDFRVFRVRALRVVDGST FRETPGTNPQATIMMMGRYIGQKMIDERHSRRQVRTSTD |
Full Sequence |
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Protein Sequence Length: 593 Download |
MAAIPTRLHL LLAALLVAPT LAAAQPRGFG GVVAPPPAYA RYVVDAAETA AEEAYDYIVV 60 GGGTAGCPLA ATLAGPGGGR VLVLERGGAP AEFPPLATAG GFVRTLAMAD PAPESDAPAQ 120 TFASEDGVPN VRARVLGGAT SINAGFYSRA HPDWFRSHGE GGEAMNWDMK LVNSSYEWVE 180 RELAFQPVVR GWQAAVRAGL LEANVTPWNG FTMDHVSGTK VGATTFDSSG RRRSAADLLA 240 FARPGRLRVA IRATVTRIIM SPIEPVARRG RSPQPAVAAS GVVYQDRLLQ QHHALLRPGG 300 EVILSAGSLG SPQLLLLSGI GPANDLTSLG IPVFADVPDV GKHMFDNPRN GISIIPSIPI 360 DHSLIQVVGI PSANGNESYL EAASYIVPLA PILRRGGPFS PSSPLYVTVV TIMEKVPGPL 420 SEGSLWLTSS NPLESPSVRF NYLSRREDLA RCVTGMRRVA KVLESTTMDV FRSAMGSLSQ 480 DSRRREFRIV GAALPVDWRT NDTALGDFCQ QTVATLWHYH GGCVAGSVVD RDFRVFRVRA 540 LRVVDGSTFR ETPGTNPQAT IMMMGRYIGQ KMIDERHSRR QVRTSTDSSS NA* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK02106 | PRK02106 | 0.0001 | 132 | 346 | 249 | + choline dehydrogenase; Validated | ||
TIGR03970 | Rv0697 | 2.0e-9 | 131 | 465 | 361 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
pfam05199 | GMC_oxred_C | 1.0e-12 | 419 | 565 | 152 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
COG2303 | BetA | 5.0e-13 | 132 | 566 | 484 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 1.0e-113 | 106 | 579 | 514 | + Protein HOTHEAD |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005488 | binding |
GO:0005623 | cell |
GO:0006950 | response to stress |
GO:0008152 | metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN31582.1 | 0 | 1 | 582 | 1 | 588 | unknown [Zea mays] |
DDBJ | BAD37565.1 | 0 | 1 | 592 | 1 | 592 | putative (R)-(+)-mandelonitrile lyase isoform MDL3 precursor [Oryza sativa Japonica Group] |
GenBank | EAZ01933.1 | 0 | 266 | 592 | 118 | 444 | hypothetical protein OsI_23959 [Oryza sativa Indica Group] |
GenBank | EAZ37866.1 | 0.000000007 | 1 | 61 | 1 | 61 | hypothetical protein OsJ_22211 [Oryza sativa Japonica Group] |
GenBank | EAZ37866.1 | 0 | 161 | 592 | 60 | 491 | hypothetical protein OsJ_22211 [Oryza sativa Japonica Group] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gdp_B | 0 | 38 | 576 | 10 | 517 | A Chain A, Crystal Structure Of Exo-1,3-Beta Glucanse From Saccharomyces Cerevisiae |
PDB | 3gdp_A | 0 | 38 | 576 | 10 | 517 | A Chain A, Crystal Structure Of Exo-1,3-Beta Glucanse From Saccharomyces Cerevisiae |
PDB | 3gdn_B | 0 | 38 | 576 | 10 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 3gdn_A | 0 | 38 | 576 | 10 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 1ju2_B | 0 | 38 | 576 | 10 | 517 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
amygdalin and prunasin degradation | MANDELONITRILE-LYASE-RXN | EC-4.1.2.10 | (R)-mandelonitrile lyase |
vicianin bioactivation | MANDELONITRILE-LYASE-RXN | EC-4.1.2.10 | (R)-mandelonitrile lyase |