y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.302690.1 |
Family | AA3 |
Protein Properties | Length: 412 Molecular Weight: 45102.5 Isoelectric Point: 9.4936 |
Chromosome | Chromosome/Scaffold: 02951 Start: 788270 End: 790991 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 52 | 404 | 0 |
SYANPSNLNVLLYATARSIIFPSLGKRRPKAHGVVFEDSKGIKHRAYLKYGSKSEIIISAGCLGSPQLLMLSGLGPAQHLKAHNITVVLDHPMVGQSVSD NPMNAVFVPSPVPVEVSLIEVVGITQNGTYIEAASGENFAGGPSTRDFGMFSPKIGQLSTVPPKQRTAEAIAKATEAMKELNEAAFRGGFILEKIMGPIS SGHLELRTRDPNDNPSVTFNYFKEPTDLHRCVAGINLIRRIIDSKSFSRFRYDNVSVATLLNMTASAPINLLPKHENLSRSPEQYCRDTVMTIWHYHGGC QTGAVVDRDYRVFGVDSLRVVDGSTFHDSPGTNPQATVMMLGRYVGVRILRER |
Full Sequence |
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Protein Sequence Length: 412 Download |
MGEWQSAVRD GLIEAGVKPN NGFTYDHLYG TKVGGTIFDH HGHRHTAADL LSYANPSNLN 60 VLLYATARSI IFPSLGKRRP KAHGVVFEDS KGIKHRAYLK YGSKSEIIIS AGCLGSPQLL 120 MLSGLGPAQH LKAHNITVVL DHPMVGQSVS DNPMNAVFVP SPVPVEVSLI EVVGITQNGT 180 YIEAASGENF AGGPSTRDFG MFSPKIGQLS TVPPKQRTAE AIAKATEAMK ELNEAAFRGG 240 FILEKIMGPI SSGHLELRTR DPNDNPSVTF NYFKEPTDLH RCVAGINLIR RIIDSKSFSR 300 FRYDNVSVAT LLNMTASAPI NLLPKHENLS RSPEQYCRDT VMTIWHYHGG CQTGAVVDRD 360 YRVFGVDSLR VVDGSTFHDS PGTNPQATVM MLGRYVGVRI LRERLKIRHQ K* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK02106 | PRK02106 | 1.0e-15 | 247 | 393 | 151 | + choline dehydrogenase; Validated | ||
PRK02106 | PRK02106 | 2.0e-18 | 40 | 151 | 116 | + choline dehydrogenase; Validated | ||
pfam05199 | GMC_oxred_C | 1.0e-27 | 249 | 393 | 150 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
COG2303 | BetA | 1.0e-32 | 40 | 404 | 376 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 0 | 4 | 405 | 405 | + Protein HOTHEAD |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI34759.1 | 0 | 1 | 405 | 168 | 572 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001053612.1 | 0 | 1 | 405 | 170 | 581 | Os04g0573100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002282510.1 | 0 | 1 | 405 | 134 | 538 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298074.1 | 0 | 1 | 405 | 167 | 570 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509694.1 | 0 | 1 | 411 | 171 | 548 | glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gdp_B | 0 | 4 | 404 | 154 | 517 | A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis |
PDB | 3gdp_A | 0 | 4 | 404 | 154 | 517 | A Chain A, Crystal Structure Of A 6-Sst6-Sft From Pachysandra Terminalis |
PDB | 3gdn_B | 0 | 4 | 404 | 154 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 3gdn_A | 0 | 4 | 404 | 154 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 1ju2_B | 0 | 4 | 404 | 154 | 517 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO799688 | 295 | 111 | 405 | 0 |
HO796743 | 403 | 3 | 404 | 0 |
CX672181 | 276 | 127 | 401 | 0 |
FQ439655 | 277 | 129 | 405 | 0 |
DY951927 | 274 | 131 | 404 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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