y
Basic Information | |
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Species | Selaginella moellendorffii |
Cazyme ID | 429523 |
Family | AA3 |
Protein Properties | Length: 570 Molecular Weight: 61771.6 Isoelectric Point: 5.632 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 31 | 551 | 0 |
EASSSASSNEEYDYIVVGGGTAGCPLAATLSEKFKVLLLERGGVPYGNPDIERIEMFVHNLVWTNATSPAQAFISEDGVINRRPRVLGGGTCLNAGFYTR ASQEFIQKAGWDEKLVDESYSWVENVVAFAPELKQWQSAVRRGLLEVGILPDNGVTYDHLIGTKTGGSIFDSNGHRHTAADLLKYANPSSIKVMLHATTN KILFTDSSLTLRLSADSERPRAYGVVYTDTSGMEHRAVLNSNPRSEVILSAGALGSPQLLMLSGIGPEEHLKAFKIPVVMNAPNVGQGMADNPMNAIFVP SPKPLEVSLVEVVGITSFGSFIESASPALGITMISSVPPPLRTPSFIQAVQNQLQEMSSYLPRTGVLMEKVDGPVSSGYLKLRNTDPHDNPAVRFNYFSD PQDLNKCVQGIQLIERVIGSSSMTSFTYVNPEEIPEPMLKFVSLLGNLLPLDTSNRIAMETFCRATVTTIWHYHGGCQVGRVVDDSHRVIGVNNLRVIDG STFLSSPGTNPQATVMMMGRQ |
Full Sequence |
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Protein Sequence Length: 570 Download |
MENELLAIVS VLLLLSAVVG AQPGKFTFLQ EASSSASSNE EYDYIVVGGG TAGCPLAATL 60 SEKFKVLLLE RGGVPYGNPD IERIEMFVHN LVWTNATSPA QAFISEDGVI NRRPRVLGGG 120 TCLNAGFYTR ASQEFIQKAG WDEKLVDESY SWVENVVAFA PELKQWQSAV RRGLLEVGIL 180 PDNGVTYDHL IGTKTGGSIF DSNGHRHTAA DLLKYANPSS IKVMLHATTN KILFTDSSLT 240 LRLSADSERP RAYGVVYTDT SGMEHRAVLN SNPRSEVILS AGALGSPQLL MLSGIGPEEH 300 LKAFKIPVVM NAPNVGQGMA DNPMNAIFVP SPKPLEVSLV EVVGITSFGS FIESASPALG 360 ITMISSVPPP LRTPSFIQAV QNQLQEMSSY LPRTGVLMEK VDGPVSSGYL KLRNTDPHDN 420 PAVRFNYFSD PQDLNKCVQG IQLIERVIGS SSMTSFTYVN PEEIPEPMLK FVSLLGNLLP 480 LDTSNRIAME TFCRATVTTI WHYHGGCQVG RVVDDSHRVI GVNNLRVIDG STFLSSPGTN 540 PQATVMMMGR QVYGCEYPQG TWIKLLISI* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR01810 | betA | 1.0e-22 | 43 | 322 | 318 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
pfam05199 | GMC_oxred_C | 2.0e-28 | 404 | 549 | 151 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
TIGR03970 | Rv0697 | 2.0e-33 | 43 | 552 | 558 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
COG2303 | BetA | 6.0e-47 | 39 | 553 | 575 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 0 | 39 | 550 | 528 | + Protein HOTHEAD |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI34759.1 | 0 | 26 | 550 | 32 | 561 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001053612.1 | 0 | 5 | 550 | 13 | 570 | Os04g0573100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002282510.1 | 0 | 33 | 550 | 4 | 527 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002446965.1 | 0 | 5 | 550 | 15 | 574 | hypothetical protein SORBIDRAFT_06g025960 [Sorghum bicolor] |
RefSeq | XP_002510860.1 | 0 | 26 | 550 | 31 | 560 | glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3red_L | 0 | 25 | 552 | 8 | 510 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_K | 0 | 25 | 552 | 8 | 510 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_J | 0 | 25 | 552 | 8 | 510 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_I | 0 | 25 | 552 | 8 | 510 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_H | 0 | 25 | 552 | 8 | 510 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
cutin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
cutin biosynthesis | RXN-9802 | EC-1.1.1 | 16-hydroxypalmitate dehydrogenase |
suberin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |