y
Basic Information | |
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Species | Picea abies |
Cazyme ID | MA_115358g0010 |
Family | AA3 |
Protein Properties | Length: 560 Molecular Weight: 61396.2 Isoelectric Point: 6.2456 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 68 | 557 | 0 |
RTASRTYDYIVVGGGTAGCPLATTLSANYSVLVIERGGSPYGDPDIENAEVFGKLLGETNNYTSPAQTFISEDGVTLARARVLGGATALNAGFYSRASSR YVTKMEWDEGLVKDSYEWVEKQNAFEPHNLSTWSSAFRDGLLEAGVVPYNGYTLDHVEGTKISASIFDNNGKRHTAADLLKTANPNNIVVLLNATVSRIL FNSPTSQGKPRARGVEFVDANGRSYQALLTESSRSSEVILSAGSIGSPQLLLLSGIGPSEHLQEFNIPLVLHLPLVGKGIQDSPRATVTVQTPTPHEFCS IQAVGILPGSQNYIESSFFVQPKNVYAGNIFEKLAFPLSRGELRLRSRDPRDNPSVRYNYYSHPLDLERCVDGVRVIDKILKTQFLQRFTYAAANDSSPE FHFIGQALPNNTSDDAAVVQFCRDTLNTMWHFHGGCHVGSVVNQRYQVNGVESLRIVDGSTFEDGPGTNPQATTMMLGRYVGTKILQERN |
Full Sequence |
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Protein Sequence Length: 560 Download |
MNHVFKKSEG VELLVREMMM IMAANIRIWS LLLTILMLMS SNQLLSSSQA TTTPSDTSFV 60 FITVDGNRTA SRTYDYIVVG GGTAGCPLAT TLSANYSVLV IERGGSPYGD PDIENAEVFG 120 KLLGETNNYT SPAQTFISED GVTLARARVL GGATALNAGF YSRASSRYVT KMEWDEGLVK 180 DSYEWVEKQN AFEPHNLSTW SSAFRDGLLE AGVVPYNGYT LDHVEGTKIS ASIFDNNGKR 240 HTAADLLKTA NPNNIVVLLN ATVSRILFNS PTSQGKPRAR GVEFVDANGR SYQALLTESS 300 RSSEVILSAG SIGSPQLLLL SGIGPSEHLQ EFNIPLVLHL PLVGKGIQDS PRATVTVQTP 360 TPHEFCSIQA VGILPGSQNY IESSFFVQPK NVYAGNIFEK LAFPLSRGEL RLRSRDPRDN 420 PSVRYNYYSH PLDLERCVDG VRVIDKILKT QFLQRFTYAA ANDSSPEFHF IGQALPNNTS 480 DDAAVVQFCR DTLNTMWHFH GGCHVGSVVN QRYQVNGVES LRIVDGSTFE DGPGTNPQAT 540 TMMLGRYVGT KILQERNEGY 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03970 | Rv0697 | 3.0e-42 | 75 | 545 | 527 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
TIGR01810 | betA | 1.0e-45 | 75 | 553 | 566 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
PRK02106 | PRK02106 | 2.0e-49 | 69 | 545 | 571 | + choline dehydrogenase; Validated | ||
COG2303 | BetA | 6.0e-55 | 68 | 556 | 560 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 0 | 73 | 556 | 532 | + Protein HOTHEAD |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK25456.1 | 0 | 19 | 558 | 1 | 558 | unknown [Picea sitchensis] |
EMBL | CBI34759.1 | 0 | 74 | 556 | 47 | 571 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002275841.1 | 0 | 73 | 556 | 52 | 577 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002277531.1 | 0 | 36 | 556 | 14 | 546 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002282510.1 | 0 | 74 | 556 | 13 | 537 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gdp_B | 0 | 50 | 557 | 2 | 518 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3gdp_A | 0 | 50 | 557 | 2 | 518 | A Chain A, The Structure Of Soybean Peroxidase |
PDB | 3gdn_B | 0 | 50 | 557 | 2 | 518 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 3gdn_A | 0 | 50 | 557 | 2 | 518 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 1ju2_B | 0 | 50 | 557 | 2 | 518 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |