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Basic Information | |
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Species | Arabidopsis thaliana |
Cazyme ID | AT1G12570.1 |
Family | AA3 |
Protein Properties | Length: 573 Molecular Weight: 62000.4 Isoelectric Point: 8.8178 |
Chromosome | Chromosome/Scaffold: 1 Start: 4277993 End: 4280862 |
Description | HOTHEAD precursor, putative, expressed |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 42 | 568 | 0 |
TTSYYDYIIIGGGTAGCPLAATLSQNASVLLLERGDSPYNNPNITRLSAFGAALSDLSESSPSQRFVSEDGVINARARVLGGGSALNAGFYTRAGTKYVR NMGWDGALANESYQWVEAKVAFQPPMGRWQTAVRDGLLEAGIVPNNGFTYDHINGTKFGGTIFDRNGNRHTAADLLEYADPKGITVLLHATVHRILFRTR GTTKPIANGVVYRDRTGQAHRAYLKEGALSEIILSAGTLGSPQLLMLSGVGPSAQLQAQNITVVMDQPHVGQGMYDNPMNAVFVPSPVPVEVSLIEVVGI TGEGTYVEAAGGENFGGGGGGSSGSSSTRDYYAMFSPRATLLESNSMTKLSSAQPFQGGFLLEKVMGPLSTGHLELKTRNPKDNPIVTFNYFQHPDDLKR CVRGIQTIERVVQSKAFSRYKYADVSFEYLLNLTASTPVNLRPPRSGPGASLPPSAEEFCQHTVTTIWHYHGGCVVGRVVDGDYKVIGIDRLRVIDMSTV GYCPGTNPQATVMMLGRYMGVKILRER |
Full Sequence |
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Protein Sequence Length: 573 Download |
MMDRFWSWRL FVALSLFLHS PICSSDKAPN YSFMRDATGS PTTSYYDYII IGGGTAGCPL 60 AATLSQNASV LLLERGDSPY NNPNITRLSA FGAALSDLSE SSPSQRFVSE DGVINARARV 120 LGGGSALNAG FYTRAGTKYV RNMGWDGALA NESYQWVEAK VAFQPPMGRW QTAVRDGLLE 180 AGIVPNNGFT YDHINGTKFG GTIFDRNGNR HTAADLLEYA DPKGITVLLH ATVHRILFRT 240 RGTTKPIANG VVYRDRTGQA HRAYLKEGAL SEIILSAGTL GSPQLLMLSG VGPSAQLQAQ 300 NITVVMDQPH VGQGMYDNPM NAVFVPSPVP VEVSLIEVVG ITGEGTYVEA AGGENFGGGG 360 GGSSGSSSTR DYYAMFSPRA TLLESNSMTK LSSAQPFQGG FLLEKVMGPL STGHLELKTR 420 NPKDNPIVTF NYFQHPDDLK RCVRGIQTIE RVVQSKAFSR YKYADVSFEY LLNLTASTPV 480 NLRPPRSGPG ASLPPSAEEF CQHTVTTIWH YHGGCVVGRV VDGDYKVIGI DRLRVIDMST 540 VGYCPGTNPQ ATVMMLGRYM GVKILRERLT KK* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR01810 | betA | 3.0e-7 | 411 | 557 | 153 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
TIGR01810 | betA | 7.0e-21 | 47 | 318 | 307 | + choline dehydrogenase. Choline dehydrogenase catalyzes the conversion of exogenously supplied choline into the intermediate glycine betaine aldehyde, as part of a two-step oxidative reaction leading to the formation of osmoprotectant betaine. This enzymatic system can be found in both gram-positive and gram-negative bacteria. As in Escherichia coli , Staphylococcus xylosus , and Sinorhizobium meliloti, this enzyme is found associated in a transciptionally co-induced gene cluster with betaine aldehyde dehydrogenase, the second catalytic enzyme in this reaction. Other gram-positive organisms have been shown to employ a different enzymatic system, utlizing a soluable choline oxidase or type III alcohol dehydrogenase instead of choline dehydrogenase. This enzyme is a member of the GMC oxidoreductase family (pfam00732 and pfam05199), sharing a common evoluntionary origin and enzymatic reaction with alcohol dehydrogenase. Outgrouping from this model, Caulobacter crescentus shares sequence homology with choline dehydrogenase, yet other genes participating in this enzymatic reaction have not currently been identified [Cellular processes, Adaptations to atypical conditions]. | ||
TIGR03970 | Rv0697 | 2.0e-24 | 47 | 557 | 549 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
COG2303 | BetA | 6.0e-35 | 46 | 568 | 568 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 0 | 10 | 572 | 593 | + Protein HOTHEAD |
Gene Ontology | |
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GO Term | Description |
GO:0006066 | alcohol metabolic process |
GO:0012505 | endomembrane system |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0016832 | aldehyde-lyase activity |
GO:0050660 | flavin adenine dinucleotide binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF79648.1 | 0 | 34 | 572 | 1 | 539 | AC025416_22 F5O11.31 [Arabidopsis thaliana] |
GenBank | AAF88098.1 | 0 | 28 | 572 | 5 | 549 | AC025417_26 T12C24.11 [Arabidopsis thaliana] |
GenBank | AAL47442.1 | 0 | 1 | 572 | 1 | 572 | At1g12570/T12C24_9 [Arabidopsis thaliana] |
RefSeq | NP_172718.2 | 0 | 1 | 572 | 1 | 572 | glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] |
RefSeq | XP_002298074.1 | 0 | 16 | 572 | 17 | 573 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gdp_B | 0 | 24 | 568 | 4 | 517 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
PDB | 3gdp_A | 0 | 24 | 568 | 4 | 517 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
PDB | 3gdn_B | 0 | 24 | 568 | 4 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 3gdn_A | 0 | 24 | 568 | 4 | 517 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 1ju2_B | 0 | 24 | 568 | 4 | 517 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
cutin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |
cutin biosynthesis | RXN-9802 | EC-1.1.1 | 16-hydroxypalmitate dehydrogenase |
suberin biosynthesis | RXN-2121 | EC-1.1.1 | 18-hydroxyoleate dehydrogenase |