Genome Details
Selected Rep_genome_ID: HRGMv2_2140
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lactonifactor
Species
Lactonifactor sp009677585
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_2140 | 4,645,286 | 99.36% | 0.652% | South Korea | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2140_CGC21 | CGCFAM_00003 | Yes | 9 | 4 | |
| HRGMv2_2140_CGC20 | CGCFAM_00039 | Yes | 6 | 3 | |
| HRGMv2_2140_CGC34 | CGCFAM_00107 | Yes | 4 | 1 | beta-glucan |
| HRGMv2_2140_CGC25 | CGCFAM_00163 | Yes | 3 | 1 | |
| HRGMv2_2140_CGC4 | CGCFAM_00222 | Yes | 7 | 1 | |
| HRGMv2_2140_CGC31 | CGCFAM_00242 | Yes | 5 | 2 | |
| HRGMv2_2140_CGC29 | CGCFAM_00247 | Yes | 6 | 3 | |
| HRGMv2_2140_CGC22 | CGCFAM_00660 | Yes | 7 | 3 | |
| HRGMv2_2140_CGC19 | CGCFAM_00763 | Yes | 6 | 1 | |
| HRGMv2_2140_CGC17 | CGCFAM_00834 | Yes | 4 | 2 | |
| HRGMv2_2140_CGC14 | CGCFAM_01406 | Yes | 5 | 2 | |
| HRGMv2_2140_CGC37 | CGCFAM_01683 | Yes | 8 | 2 | |
| HRGMv2_2140_CGC6 | CGCFAM_01709 | Yes | 9 | 2 | |
| HRGMv2_2140_CGC33 | CGCFAM_02062 | Yes | 4 | 1 | |
| HRGMv2_2140_CGC11 | CGCFAM_02490 | Yes | 4 | 1 | |
| HRGMv2_2140_CGC35 | CGCFAM_02491 | Yes | 5 | 1 | |
| HRGMv2_2140_CGC1 | CGCFAM_04039 | Yes | 3 | 1 | |
| HRGMv2_2140_CGC18 | CGCFAM_06101 | Yes | 10 | 3 | |
| HRGMv2_2140_CGC8 | CGCFAM_06102 | Yes | 9 | 1 | |
| HRGMv2_2140_CGC36 | CGCFAM_06401 | Yes | 8 | 1 | beta-glucan |
| HRGMv2_2140_CGC5 | CGCFAM_06804 | Yes | 6 | 1 | |
| HRGMv2_2140_CGC24 | CGCFAM_07952 | Yes | 4 | 1 | |
| HRGMv2_2140_CGC13 | CGCFAM_08974 | Yes | 7 | 1 |
Top CAZyme Families