Cluster: HRGMv2_2140_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2140
- CGC Family ID: CGCFAM_00247
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2140_14 | HRGMv2_2140_14_21 | 23562 | 25289 | - | GH13_31 |
| CAZyme | HRGMv2_2140_14 | HRGMv2_2140_14_22 | 25286 | 27142 | - | GH13_4 |
| CAZyme | HRGMv2_2140_14 | HRGMv2_2140_14_23 | 27147 | 28508 | - | GH32 |
| TC | HRGMv2_2140_14 | HRGMv2_2140_14_24 | 28537 | 29397 | - | 3.A.1.1.28 |
| TC | HRGMv2_2140_14 | HRGMv2_2140_14_25 | 29397 | 30269 | - | 3.A.1.1.45 |
| TC | HRGMv2_2140_14 | HRGMv2_2140_14_26 | 30286 | 31662 | - | 3.A.1.1.45 |
Gene ID: HRGMv2_2140_14_21
Type: CAZyme
Location: 23562 - 25289 (-)
Type: CAZyme
Location: 23562 - 25289 (-)
Gene ID: HRGMv2_2140_14_22
Type: CAZyme
Location: 25286 - 27142 (-)
Type: CAZyme
Location: 25286 - 27142 (-)
Gene ID: HRGMv2_2140_14_23
Type: CAZyme
Location: 27147 - 28508 (-)
Type: CAZyme
Location: 27147 - 28508 (-)
Gene ID: HRGMv2_2140_14_24
Type: TC
Location: 28537 - 29397 (-)
Type: TC
Location: 28537 - 29397 (-)
Gene ID: HRGMv2_2140_14_25
Type: TC
Location: 29397 - 30269 (-)
Type: TC
Location: 29397 - 30269 (-)
Gene ID: HRGMv2_2140_14_26
Type: TC
Location: 30286 - 31662 (-)
Type: TC
Location: 30286 - 31662 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lactonifactor
Species
Lactonifactor sp009677585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.