Cluster: HRGMv2_2140_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2140
- CGC Family ID: CGCFAM_00660
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2140_7 | HRGMv2_2140_7_167 | 188301 | 189368 | - | GT2 |
| pfam | HRGMv2_2140_7 | HRGMv2_2140_7_168 | 189374 | 190561 | - | Wzy_C |
| pfam | HRGMv2_2140_7 | HRGMv2_2140_7_169 | 190775 | 191920 | - | Glyphos_transf |
| CAZyme | HRGMv2_2140_7 | HRGMv2_2140_7_170 | 191930 | 192997 | - | GT2 |
| CAZyme | HRGMv2_2140_7 | HRGMv2_2140_7_171 | 193001 | 194059 | - | GT2 |
| pfam | HRGMv2_2140_7 | HRGMv2_2140_7_172 | 194073 | 195170 | - | GLF | NAD_binding_8 |
| TC | HRGMv2_2140_7 | HRGMv2_2140_7_173 | 195173 | 196597 | - | 9.B.18.1.3 |
Gene ID: HRGMv2_2140_7_167
Type: CAZyme
Location: 188301 - 189368 (-)
Type: CAZyme
Location: 188301 - 189368 (-)
Gene ID: HRGMv2_2140_7_168
Type: pfam
Location: 189374 - 190561 (-)
Type: pfam
Location: 189374 - 190561 (-)
Gene ID: HRGMv2_2140_7_169
Type: pfam
Location: 190775 - 191920 (-)
Type: pfam
Location: 190775 - 191920 (-)
Gene ID: HRGMv2_2140_7_170
Type: CAZyme
Location: 191930 - 192997 (-)
Type: CAZyme
Location: 191930 - 192997 (-)
Gene ID: HRGMv2_2140_7_171
Type: CAZyme
Location: 193001 - 194059 (-)
Type: CAZyme
Location: 193001 - 194059 (-)
Gene ID: HRGMv2_2140_7_172
Type: pfam
Location: 194073 - 195170 (-)
Type: pfam
Location: 194073 - 195170 (-)
Gene ID: HRGMv2_2140_7_173
Type: TC
Location: 195173 - 196597 (-)
Type: TC
Location: 195173 - 196597 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lactonifactor
Species
Lactonifactor sp009677585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.