Cluster: HRGMv2_2140_CGC35
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2140
- CGC Family ID: CGCFAM_02491
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2140_22 | HRGMv2_2140_22_31 | 27213 | 29039 | + | 3.A.16.1.1 |
| CAZyme | HRGMv2_2140_22 | HRGMv2_2140_22_32 | 29372 | 31492 | + | GH13_39 |
| STP | HRGMv2_2140_22 | HRGMv2_2140_22_33 | 31963 | 32517 | + | Sigma70_r2 | Sigma70_r4_2 |
| NULL(UNKNOWN) | HRGMv2_2140_22 | HRGMv2_2140_22_34 | 32507 | 33259 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2140_22 | HRGMv2_2140_22_35 | 33247 | 34149 | + | 3.A.1.148.3 |
Gene ID: HRGMv2_2140_22_31
Type: TC
Location: 27213 - 29039 (+)
Type: TC
Location: 27213 - 29039 (+)
Gene ID: HRGMv2_2140_22_32
Type: CAZyme
Location: 29372 - 31492 (+)
Type: CAZyme
Location: 29372 - 31492 (+)
Gene ID: HRGMv2_2140_22_33
Type: STP
Location: 31963 - 32517 (+)
Type: STP
Location: 31963 - 32517 (+)
Gene ID: HRGMv2_2140_22_34
Type:
Location: 32507 - 33259 (+)
Type:
Location: 32507 - 33259 (+)
Gene ID: HRGMv2_2140_22_35
Type: TC
Location: 33247 - 34149 (+)
Type: TC
Location: 33247 - 34149 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lactonifactor
Species
Lactonifactor sp009677585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.