Cluster: HRGMv2_2140_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2140
- CGC Family ID: CGCFAM_00039
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2140_7 | HRGMv2_2140_7_134 | 149114 | 150058 | - | GT2 |
| pfam | HRGMv2_2140_7 | HRGMv2_2140_7_135 | 150134 | 151240 | - | LytR_cpsA_psr |
| TC | HRGMv2_2140_7 | HRGMv2_2140_7_136 | 151257 | 152660 | - | 9.B.18.1.1 |
| pfam | HRGMv2_2140_7 | HRGMv2_2140_7_137 | 152749 | 154278 | - | Glucos_trans_II |
| CAZyme | HRGMv2_2140_7 | HRGMv2_2140_7_138 | 154307 | 155263 | - | GT2 |
| CAZyme | HRGMv2_2140_7 | HRGMv2_2140_7_139 | 155277 | 157142 | - | GT2 | GT2 |
Gene ID: HRGMv2_2140_7_134
Type: CAZyme
Location: 149114 - 150058 (-)
Type: CAZyme
Location: 149114 - 150058 (-)
Gene ID: HRGMv2_2140_7_135
Type: pfam
Location: 150134 - 151240 (-)
Type: pfam
Location: 150134 - 151240 (-)
Gene ID: HRGMv2_2140_7_136
Type: TC
Location: 151257 - 152660 (-)
Type: TC
Location: 151257 - 152660 (-)
Gene ID: HRGMv2_2140_7_137
Type: pfam
Location: 152749 - 154278 (-)
Type: pfam
Location: 152749 - 154278 (-)
Gene ID: HRGMv2_2140_7_138
Type: CAZyme
Location: 154307 - 155263 (-)
Type: CAZyme
Location: 154307 - 155263 (-)
Gene ID: HRGMv2_2140_7_139
Type: CAZyme
Location: 155277 - 157142 (-)
Type: CAZyme
Location: 155277 - 157142 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lactonifactor
Species
Lactonifactor sp009677585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.