Cluster: HRGMv2_2140_CGC31
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2140
- CGC Family ID: CGCFAM_00242
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2140_15 | HRGMv2_2140_15_40 | 47838 | 48710 | - | 3.A.1.1.18 |
| TC | HRGMv2_2140_15 | HRGMv2_2140_15_41 | 48723 | 49616 | - | 3.A.1.1.20 |
| STP | HRGMv2_2140_15 | HRGMv2_2140_15_42 | 49689 | 51047 | - | SBP_bac_1 |
| CAZyme | HRGMv2_2140_15 | HRGMv2_2140_15_43 | 51324 | 52244 | + | GH43_24 |
| CAZyme | HRGMv2_2140_15 | HRGMv2_2140_15_44 | 52262 | 54427 | - | GH112 |
Gene ID: HRGMv2_2140_15_40
Type: TC
Location: 47838 - 48710 (-)
Type: TC
Location: 47838 - 48710 (-)
Gene ID: HRGMv2_2140_15_41
Type: TC
Location: 48723 - 49616 (-)
Type: TC
Location: 48723 - 49616 (-)
Gene ID: HRGMv2_2140_15_42
Type: STP
Location: 49689 - 51047 (-)
Type: STP
Location: 49689 - 51047 (-)
Gene ID: HRGMv2_2140_15_43
Type: CAZyme
Location: 51324 - 52244 (+)
Type: CAZyme
Location: 51324 - 52244 (+)
Gene ID: HRGMv2_2140_15_44
Type: CAZyme
Location: 52262 - 54427 (-)
Type: CAZyme
Location: 52262 - 54427 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lactonifactor
Species
Lactonifactor sp009677585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.