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Cluster: HRGMv2_2140_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2140_1 HRGMv2_2140_1_260 296983 298479 - 9.A.11.1.2
TF HRGMv2_2140_1 HRGMv2_2140_1_261 298562 299236 - GntR
pfam HRGMv2_2140_1 HRGMv2_2140_1_262 299233 300111 - GHMP_kinases_N | GHMP_kinases_C
CAZyme HRGMv2_2140_1 HRGMv2_2140_1_263 300352 301911 - CBM50
pfam HRGMv2_2140_1 HRGMv2_2140_1_264 301934 302344 - PrcB_C
pfam HRGMv2_2140_1 HRGMv2_2140_1_265 302507 303253 + Acyltransferase
TC HRGMv2_2140_1 HRGMv2_2140_1_266 303256 303792 - 2.A.51.1.6
Gene ID: HRGMv2_2140_1_260
Type: TC
Location: 296983 - 298479 (-)
Gene ID: HRGMv2_2140_1_261
Type: TF
Location: 298562 - 299236 (-)
Gene ID: HRGMv2_2140_1_262
Type: pfam
Location: 299233 - 300111 (-)
Gene ID: HRGMv2_2140_1_263
Type: CAZyme
Location: 300352 - 301911 (-)
Gene ID: HRGMv2_2140_1_264
Type: pfam
Location: 301934 - 302344 (-)
Gene ID: HRGMv2_2140_1_265
Type: pfam
Location: 302507 - 303253 (+)
Gene ID: HRGMv2_2140_1_266
Type: TC
Location: 303256 - 303792 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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