Cluster: HRGMv2_2140_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2140
- CGC Family ID: CGCFAM_00834
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2140_5 | HRGMv2_2140_5_178 | 179904 | 180773 | + | 3.A.1.1.20 |
| TC | HRGMv2_2140_5 | HRGMv2_2140_5_179 | 180784 | 181626 | + | 3.A.1.1.41 |
| CAZyme | HRGMv2_2140_5 | HRGMv2_2140_5_180 | 181657 | 183789 | + | CBM66 |
| CAZyme | HRGMv2_2140_5 | HRGMv2_2140_5_181 | 183792 | 185888 | + | CBM66 |
Gene ID: HRGMv2_2140_5_178
Type: TC
Location: 179904 - 180773 (+)
Type: TC
Location: 179904 - 180773 (+)
Gene ID: HRGMv2_2140_5_179
Type: TC
Location: 180784 - 181626 (+)
Type: TC
Location: 180784 - 181626 (+)
Gene ID: HRGMv2_2140_5_180
Type: CAZyme
Location: 181657 - 183789 (+)
Type: CAZyme
Location: 181657 - 183789 (+)
Gene ID: HRGMv2_2140_5_181
Type: CAZyme
Location: 183792 - 185888 (+)
Type: CAZyme
Location: 183792 - 185888 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lactonifactor
Species
Lactonifactor sp009677585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.