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Cluster: HRGMv2_2140_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2140_1 HRGMv2_2140_1_288 326590 327861 - 2.A.40.1.1
CAZyme HRGMv2_2140_1 HRGMv2_2140_1_289 328002 329927 - GH127
NULL(UNKNOWN) HRGMv2_2140_1 HRGMv2_2140_1_290 329938 332247 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2140_1 HRGMv2_2140_1_291 332252 333082 - 3.A.1.1.25
TC HRGMv2_2140_1 HRGMv2_2140_1_292 333085 333972 - 3.A.1.1.7
TC HRGMv2_2140_1 HRGMv2_2140_1_293 334035 335357 - 3.A.1.1.22
Gene ID: HRGMv2_2140_1_288
Type: TC
Location: 326590 - 327861 (-)
Gene ID: HRGMv2_2140_1_289
Type: CAZyme
Location: 328002 - 329927 (-)
Gene ID: HRGMv2_2140_1_290
Type:
Location: 329938 - 332247 (-)
Gene ID: HRGMv2_2140_1_291
Type: TC
Location: 332252 - 333082 (-)
Gene ID: HRGMv2_2140_1_292
Type: TC
Location: 333085 - 333972 (-)
Gene ID: HRGMv2_2140_1_293
Type: TC
Location: 334035 - 335357 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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