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Cluster: HRGMv2_2140_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2140_7 HRGMv2_2140_7_144 160612 161568 + GT2
pfam HRGMv2_2140_7 HRGMv2_2140_7_145 161625 162473 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
CAZyme HRGMv2_2140_7 HRGMv2_2140_7_146 162503 164161 - GT2
CAZyme HRGMv2_2140_7 HRGMv2_2140_7_147 164164 165414 - GT4
CAZyme HRGMv2_2140_7 HRGMv2_2140_7_148 165450 166421 - GT2
NULL(UNKNOWN) HRGMv2_2140_7 HRGMv2_2140_7_149 166434 167672 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2140_7 HRGMv2_2140_7_150 167665 168600 - Methyltransf_11
TC HRGMv2_2140_7 HRGMv2_2140_7_151 168618 169892 - 3.A.1.103.6
TC HRGMv2_2140_7 HRGMv2_2140_7_152 169901 170692 - 3.A.1.104.1
Gene ID: HRGMv2_2140_7_144
Type: CAZyme
Location: 160612 - 161568 (+)
Gene ID: HRGMv2_2140_7_145
Type: pfam
Location: 161625 - 162473 (-)
Gene ID: HRGMv2_2140_7_146
Type: CAZyme
Location: 162503 - 164161 (-)
Gene ID: HRGMv2_2140_7_147
Type: CAZyme
Location: 164164 - 165414 (-)
Gene ID: HRGMv2_2140_7_148
Type: CAZyme
Location: 165450 - 166421 (-)
Gene ID: HRGMv2_2140_7_149
Type:
Location: 166434 - 167672 (-)
Gene ID: HRGMv2_2140_7_150
Type: pfam
Location: 167665 - 168600 (-)
Gene ID: HRGMv2_2140_7_151
Type: TC
Location: 168618 - 169892 (-)
Gene ID: HRGMv2_2140_7_152
Type: TC
Location: 169901 - 170692 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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