dbCAN Logo

Cluster: HRGMv2_2140_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2140_25 HRGMv2_2140_25_1 364 1818 + 3.A.1.2.20
TF HRGMv2_2140_25 HRGMv2_2140_25_2 1855 2622 + HTH_AraC | HTH_AraC
pfam HRGMv2_2140_25 HRGMv2_2140_25_3 2875 3705 + AP_endonuc_2
TC HRGMv2_2140_25 HRGMv2_2140_25_4 3722 5200 + 3.A.1.2.19
TC HRGMv2_2140_25 HRGMv2_2140_25_5 5187 6158 + 3.A.1.2.19
STP HRGMv2_2140_25 HRGMv2_2140_25_6 6184 7215 + Peripla_BP_1
pfam HRGMv2_2140_25 HRGMv2_2140_25_7 7246 8325 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
CAZyme HRGMv2_2140_25 HRGMv2_2140_25_8 8395 9426 + GH179
Gene ID: HRGMv2_2140_25_1
Type: TC
Location: 364 - 1818 (+)
Gene ID: HRGMv2_2140_25_2
Type: TF
Location: 1855 - 2622 (+)
Gene ID: HRGMv2_2140_25_3
Type: pfam
Location: 2875 - 3705 (+)
Gene ID: HRGMv2_2140_25_4
Type: TC
Location: 3722 - 5200 (+)
Gene ID: HRGMv2_2140_25_5
Type: TC
Location: 5187 - 6158 (+)
Gene ID: HRGMv2_2140_25_6
Type: STP
Location: 6184 - 7215 (+)
Gene ID: HRGMv2_2140_25_7
Type: pfam
Location: 7246 - 8325 (+)
Gene ID: HRGMv2_2140_25_8
Type: CAZyme
Location: 8395 - 9426 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List