Cluster: HRGMv2_2140_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2140
- CGC Family ID: CGCFAM_07952
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2140_9 | HRGMv2_2140_9_42 | 23787 | 24023 | + | 1.E.31.1.3 |
| NULL(UNKNOWN) | HRGMv2_2140_9 | HRGMv2_2140_9_43 | 24036 | 24365 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2140_9 | HRGMv2_2140_9_44 | 24370 | 24543 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2140_9 | HRGMv2_2140_9_45 | 24540 | 25658 | + | GH25 |
Gene ID: HRGMv2_2140_9_42
Type: TC
Location: 23787 - 24023 (+)
Type: TC
Location: 23787 - 24023 (+)
Gene ID: HRGMv2_2140_9_43
Type:
Location: 24036 - 24365 (+)
Type:
Location: 24036 - 24365 (+)
Gene ID: HRGMv2_2140_9_44
Type:
Location: 24370 - 24543 (+)
Type:
Location: 24370 - 24543 (+)
Gene ID: HRGMv2_2140_9_45
Type: CAZyme
Location: 24540 - 25658 (+)
Type: CAZyme
Location: 24540 - 25658 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lactonifactor
Species
Lactonifactor sp009677585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.