Cluster: HRGMv2_2140_CGC33
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2140
- CGC Family ID: CGCFAM_02062
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2140_17 | HRGMv2_2140_17_1 | 3 | 4946 | - | GH146 |
| STP | HRGMv2_2140_17 | HRGMv2_2140_17_2 | 5197 | 6396 | - | SBP_bac_1 |
| TF | HRGMv2_2140_17 | HRGMv2_2140_17_3 | 6410 | 7921 | - | HTH_AraC |
| TC | HRGMv2_2140_17 | HRGMv2_2140_17_4 | 7921 | 9717 | - | 8.A.59.2.1 |
Gene ID: HRGMv2_2140_17_1
Type: CAZyme
Location: 3 - 4946 (-)
Type: CAZyme
Location: 3 - 4946 (-)
Gene ID: HRGMv2_2140_17_2
Type: STP
Location: 5197 - 6396 (-)
Type: STP
Location: 5197 - 6396 (-)
Gene ID: HRGMv2_2140_17_3
Type: TF
Location: 6410 - 7921 (-)
Type: TF
Location: 6410 - 7921 (-)
Gene ID: HRGMv2_2140_17_4
Type: TC
Location: 7921 - 9717 (-)
Type: TC
Location: 7921 - 9717 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lactonifactor
Species
Lactonifactor sp009677585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.