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Cluster: HRGMv2_2140_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2140_6 HRGMv2_2140_6_88 119831 120985 - GT4
pfam HRGMv2_2140_6 HRGMv2_2140_6_89 121029 122366 - Wzy_C
CAZyme HRGMv2_2140_6 HRGMv2_2140_6_90 122394 123536 - GT94
NULL(UNKNOWN) HRGMv2_2140_6 HRGMv2_2140_6_91 123545 124048 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2140_6 HRGMv2_2140_6_92 124057 124824 - GT2
pfam HRGMv2_2140_6 HRGMv2_2140_6_93 124836 125762 - Aminotran_4
TC HRGMv2_2140_6 HRGMv2_2140_6_94 125776 126459 - 9.B.18.1.2
pfam HRGMv2_2140_6 HRGMv2_2140_6_95 126471 127682 - Orn_Arg_deC_N
pfam HRGMv2_2140_6 HRGMv2_2140_6_96 127717 128541 - HpcH_HpaI
TC HRGMv2_2140_6 HRGMv2_2140_6_97 129241 131118 - 9.B.18.2.1
Gene ID: HRGMv2_2140_6_88
Type: CAZyme
Location: 119831 - 120985 (-)
Gene ID: HRGMv2_2140_6_89
Type: pfam
Location: 121029 - 122366 (-)
Gene ID: HRGMv2_2140_6_90
Type: CAZyme
Location: 122394 - 123536 (-)
Gene ID: HRGMv2_2140_6_91
Type:
Location: 123545 - 124048 (-)
Gene ID: HRGMv2_2140_6_92
Type: CAZyme
Location: 124057 - 124824 (-)
Gene ID: HRGMv2_2140_6_93
Type: pfam
Location: 124836 - 125762 (-)
Gene ID: HRGMv2_2140_6_94
Type: TC
Location: 125776 - 126459 (-)
Gene ID: HRGMv2_2140_6_95
Type: pfam
Location: 126471 - 127682 (-)
Gene ID: HRGMv2_2140_6_96
Type: pfam
Location: 127717 - 128541 (-)
Gene ID: HRGMv2_2140_6_97
Type: TC
Location: 129241 - 131118 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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