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Cluster: HRGMv2_2140_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2140_32 HRGMv2_2140_32_3 1525 2385 - 3.A.1.149.1
TF HRGMv2_2140_32 HRGMv2_2140_32_4 2389 2763 - GntR
pfam HRGMv2_2140_32 HRGMv2_2140_32_5 2936 3559 - VTT_dom
CAZyme HRGMv2_2140_32 HRGMv2_2140_32_6 3549 4640 - GT4
CAZyme HRGMv2_2140_32 HRGMv2_2140_32_7 4640 5854 - GT4
pfam HRGMv2_2140_32 HRGMv2_2140_32_8 6036 6761 + TraX
NULL(UNKNOWN) HRGMv2_2140_32 HRGMv2_2140_32_9 7740 8414 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2140_32 HRGMv2_2140_32_10 8395 10455 - 3.A.7.7.1
Gene ID: HRGMv2_2140_32_3
Type: TC
Location: 1525 - 2385 (-)
Gene ID: HRGMv2_2140_32_4
Type: TF
Location: 2389 - 2763 (-)
Gene ID: HRGMv2_2140_32_5
Type: pfam
Location: 2936 - 3559 (-)
Gene ID: HRGMv2_2140_32_6
Type: CAZyme
Location: 3549 - 4640 (-)
Gene ID: HRGMv2_2140_32_7
Type: CAZyme
Location: 4640 - 5854 (-)
Gene ID: HRGMv2_2140_32_8
Type: pfam
Location: 6036 - 6761 (+)
Gene ID: HRGMv2_2140_32_9
Type:
Location: 7740 - 8414 (-)
Gene ID: HRGMv2_2140_32_10
Type: TC
Location: 8395 - 10455 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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