Genome Details
Selected Rep_genome_ID: HRGMv2_1814
Total Genomes Found: 2
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_B
Species
Citrobacter_B koseri
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_1814 | 4,561,712 | 99.88% | 0.319% | Japan | Asia | HRGM |
| Rep_961 | 4,810,390 | 99.2857% | 0.46875% | NA | NA | WIS |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_1814_CGC49 | CGCFAM_00218 | Yes | 7 | 1 | chitin |
| PUL0571_HRGMv2_1814_C41 | CGCFAM_00218 | Yes | 8 | 1 | chitin |
| HRGMv2_1814_CGC4 | CGCFAM_00236 | Yes | 7 | 1 | |
| HRGMv2_1814_CGC26 | CGCFAM_00399 | Yes | 7 | 1 | |
| HRGMv2_1814_CGC29 | CGCFAM_00443 | Yes | 8 | 1 | host glycan |
| HRGMv2_1814_CGC28 | CGCFAM_00625 | Yes | 18 | 1 | |
| HRGMv2_1814_CGC35 | CGCFAM_00695 | Yes | 20 | 3 | |
| HRGMv2_1814_CGC21 | CGCFAM_00788 | Yes | 14 | 3 | |
| HRGMv2_1814_CGC44 | CGCFAM_00789 | Yes | 8 | 2 | |
| HRGMv2_1814_CGC15 | CGCFAM_01194 | Yes | 15 | 2 | |
| HRGMv2_1814_CGC9 | CGCFAM_01367 | Yes | 22 | 1 | |
| HRGMv2_1814_CGC3 | CGCFAM_01368 | Yes | 17 | 1 | |
| HRGMv2_1814_CGC14 | CGCFAM_01555 | Yes | 12 | 1 | |
| HRGMv2_1814_CGC7 | CGCFAM_03298 | Yes | 12 | 3 | |
| HRGMv2_1814_CGC50 | CGCFAM_04024 | Yes | 6 | 3 | |
| HRGMv2_1814_CGC37 | CGCFAM_04188 | Yes | 9 | 1 | beta-glucan |
| HRGMv2_1814_CGC51 | CGCFAM_05639 | Yes | 13 | 1 | |
| HRGMv2_1814_CGC17 | CGCFAM_08326 | Yes | 8 | 1 | |
| HRGMv2_1814_CGC5 | CGCFAM_09865 | Yes | 4 | 2 |
Top CAZyme Families