dbCAN Logo

Cluster: HRGMv2_1814_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1814_3 HRGMv2_1814_3_79 82285 83895 - 2.A.1.42.2
pfam HRGMv2_1814_3 HRGMv2_1814_3_80 83905 85080 - Chorismate_bind
TC HRGMv2_1814_3 HRGMv2_1814_3_81 85268 86224 + 3.A.1.14.2
TC HRGMv2_1814_3 HRGMv2_1814_3_82 86268 87518 - 2.A.1.38.1
TC HRGMv2_1814_3 HRGMv2_1814_3_83 87630 88637 + 3.A.1.14.2
TC HRGMv2_1814_3 HRGMv2_1814_3_84 88634 89626 + 3.A.1.14.2
TC HRGMv2_1814_3 HRGMv2_1814_3_85 89623 90420 + 3.A.1.14.2
pfam HRGMv2_1814_3 HRGMv2_1814_3_86 90493 91629 - Wzz
TC HRGMv2_1814_3 HRGMv2_1814_3_87 91882 95766 - 4.C.1.1.6
pfam HRGMv2_1814_3 HRGMv2_1814_3_88 95763 95981 - MbtH
peptidase HRGMv2_1814_3 HRGMv2_1814_3_89 96011 97219 - S09.UNW
TC HRGMv2_1814_3 HRGMv2_1814_3_90 97531 99774 + 1.B.14.1.22
pfam HRGMv2_1814_3 HRGMv2_1814_3_91 99823 100476 + ACPS | 4PPT_N
TC HRGMv2_1814_3 HRGMv2_1814_3_92 100646 102679 - 2.A.15.1.4
STP HRGMv2_1814_3 HRGMv2_1814_3_93 102962 103555 + TetR_N
sulfatase HRGMv2_1814_3 HRGMv2_1814_3_94 103569 105041 + S1_6
CAZyme HRGMv2_1814_3 HRGMv2_1814_3_95 105055 106731 + AA3_2
Gene ID: HRGMv2_1814_3_79
Type: TC
Location: 82285 - 83895 (-)
Gene ID: HRGMv2_1814_3_80
Type: pfam
Location: 83905 - 85080 (-)
Gene ID: HRGMv2_1814_3_81
Type: TC
Location: 85268 - 86224 (+)
Gene ID: HRGMv2_1814_3_82
Type: TC
Location: 86268 - 87518 (-)
Gene ID: HRGMv2_1814_3_83
Type: TC
Location: 87630 - 88637 (+)
Gene ID: HRGMv2_1814_3_84
Type: TC
Location: 88634 - 89626 (+)
Gene ID: HRGMv2_1814_3_85
Type: TC
Location: 89623 - 90420 (+)
Gene ID: HRGMv2_1814_3_86
Type: pfam
Location: 90493 - 91629 (-)
Gene ID: HRGMv2_1814_3_87
Type: TC
Location: 91882 - 95766 (-)
Gene ID: HRGMv2_1814_3_88
Type: pfam
Location: 95763 - 95981 (-)
Gene ID: HRGMv2_1814_3_89
Type: peptidase
Location: 96011 - 97219 (-)
Gene ID: HRGMv2_1814_3_90
Type: TC
Location: 97531 - 99774 (+)
Gene ID: HRGMv2_1814_3_91
Type: pfam
Location: 99823 - 100476 (+)
Gene ID: HRGMv2_1814_3_92
Type: TC
Location: 100646 - 102679 (-)
Gene ID: HRGMv2_1814_3_93
Type: STP
Location: 102962 - 103555 (+)
Gene ID: HRGMv2_1814_3_94
Type: sulfatase
Location: 103569 - 105041 (+)
Gene ID: HRGMv2_1814_3_95
Type: CAZyme
Location: 105055 - 106731 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List