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Cluster: HRGMv2_1814_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1814_9 HRGMv2_1814_9_64 65464 66009 - 5.A.3.11.1
TF HRGMv2_1814_9 HRGMv2_1814_9_65 66164 67186 - LacI
TC HRGMv2_1814_9 HRGMv2_1814_9_66 67442 68896 + 4.A.1.2.3
CAZyme HRGMv2_1814_9 HRGMv2_1814_9_67 68919 70343 + GH1
peptidase HRGMv2_1814_9 HRGMv2_1814_9_68 70445 70918 - A31.003
pfam HRGMv2_1814_9 HRGMv2_1814_9_69 70911 71321 - HycH
TC HRGMv2_1814_9 HRGMv2_1814_9_70 71318 72085 - 3.D.1.9.2
TC HRGMv2_1814_9 HRGMv2_1814_9_71 72085 72627 - 3.D.1.9.2
TC HRGMv2_1814_9 HRGMv2_1814_9_72 72637 74346 - 3.D.1.9.2
TC HRGMv2_1814_9 HRGMv2_1814_9_73 74364 75287 - 3.D.1.9.2
TC HRGMv2_1814_9 HRGMv2_1814_9_74 75290 77116 - 3.D.1.9.2
TC HRGMv2_1814_9 HRGMv2_1814_9_75 77113 77724 - 3.D.1.9.2
Gene ID: HRGMv2_1814_9_64
Type: TC
Location: 65464 - 66009 (-)
Gene ID: HRGMv2_1814_9_65
Type: TF
Location: 66164 - 67186 (-)
Gene ID: HRGMv2_1814_9_66
Type: TC
Location: 67442 - 68896 (+)
Gene ID: HRGMv2_1814_9_67
Type: CAZyme
Location: 68919 - 70343 (+)
Gene ID: HRGMv2_1814_9_68
Type: peptidase
Location: 70445 - 70918 (-)
Gene ID: HRGMv2_1814_9_69
Type: pfam
Location: 70911 - 71321 (-)
Gene ID: HRGMv2_1814_9_70
Type: TC
Location: 71318 - 72085 (-)
Gene ID: HRGMv2_1814_9_71
Type: TC
Location: 72085 - 72627 (-)
Gene ID: HRGMv2_1814_9_72
Type: TC
Location: 72637 - 74346 (-)
Gene ID: HRGMv2_1814_9_73
Type: TC
Location: 74364 - 75287 (-)
Gene ID: HRGMv2_1814_9_74
Type: TC
Location: 75290 - 77116 (-)
Gene ID: HRGMv2_1814_9_75
Type: TC
Location: 77113 - 77724 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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