Cluster: PUL0571_HRGMv2_1814_C41
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate: chitin
- Genome ID: HRGMv2_1814
- CGC Family ID: CGCFAM_00218
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0571_HRGMv2_1814_C41 | HRGMv2_1814_25_37 | 38103 | 38933 | - | NAD_synthase |
| pfam | PUL0571_HRGMv2_1814_C41 | HRGMv2_1814_25_38 | 39162 | 39503 | + | BamE |
| TC | PUL0571_HRGMv2_1814_C41 | HRGMv2_1814_25_39 | 39804 | 40124 | + | 4.A.3.2.1 |
| TC | PUL0571_HRGMv2_1814_C41 | HRGMv2_1814_25_40 | 40211 | 41569 | + | 4.A.3.2.1 |
| TC | PUL0571_HRGMv2_1814_C41 | HRGMv2_1814_25_41 | 41620 | 41970 | + | 4.A.3.2.1 |
| TF | PUL0571_HRGMv2_1814_C41 | HRGMv2_1814_25_42 | 41978 | 42820 | + | HTH_AraC | HTH_AraC |
| CAZyme | PUL0571_HRGMv2_1814_C41 | HRGMv2_1814_25_43 | 42944 | 44299 | + | GH4 |
| pfam | PUL0571_HRGMv2_1814_C41 | HRGMv2_1814_25_44 | 44312 | 45070 | + | YdjC |
Gene ID: HRGMv2_1814_25_37
Type: pfam
Location: 38103 - 38933 (-)
Type: pfam
Location: 38103 - 38933 (-)
Gene ID: HRGMv2_1814_25_38
Type: pfam
Location: 39162 - 39503 (+)
Type: pfam
Location: 39162 - 39503 (+)
Gene ID: HRGMv2_1814_25_39
Type: TC
Location: 39804 - 40124 (+)
Type: TC
Location: 39804 - 40124 (+)
Gene ID: HRGMv2_1814_25_40
Type: TC
Location: 40211 - 41569 (+)
Type: TC
Location: 40211 - 41569 (+)
Gene ID: HRGMv2_1814_25_41
Type: TC
Location: 41620 - 41970 (+)
Type: TC
Location: 41620 - 41970 (+)
Gene ID: HRGMv2_1814_25_42
Type: TF
Location: 41978 - 42820 (+)
Type: TF
Location: 41978 - 42820 (+)
Gene ID: HRGMv2_1814_25_43
Type: CAZyme
Location: 42944 - 44299 (+)
Type: CAZyme
Location: 42944 - 44299 (+)
Gene ID: HRGMv2_1814_25_44
Type: pfam
Location: 44312 - 45070 (+)
Type: pfam
Location: 44312 - 45070 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_B
Species
Citrobacter_B koseri
Gene Composition
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