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Cluster: HRGMv2_1814_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1814_8 HRGMv2_1814_8_40 44235 46151 + 4.A.2.1.3
CAZyme HRGMv2_1814_8 HRGMv2_1814_8_41 46173 48806 + GH38
TC HRGMv2_1814_8 HRGMv2_1814_8_42 49489 51057 + 3.D.4.3.2
TC HRGMv2_1814_8 HRGMv2_1814_8_43 51073 52212 + 3.D.4.3.2
TC HRGMv2_1814_8 HRGMv2_1814_8_44 52227 52340 + 9.B.85.1.1
TC HRGMv2_1814_8 HRGMv2_1814_8_45 52340 52633 + 8.A.79.1.1
pfam HRGMv2_1814_8 HRGMv2_1814_8_46 52783 53181 + Acyl-ACP_TE | 4HBT | 4HBT_2
TC HRGMv2_1814_8 HRGMv2_1814_8_47 53178 53870 + 1.A.30.2.2
TC HRGMv2_1814_8 HRGMv2_1814_8_48 53874 54302 + 1.A.30.2.2
TC HRGMv2_1814_8 HRGMv2_1814_8_49 54366 55592 + 2.C.1.2.1
TC HRGMv2_1814_8 HRGMv2_1814_8_50 55725 57017 + 2.C.1.2.1
TC HRGMv2_1814_8 HRGMv2_1814_8_51 57052 57570 + 2.C.1.2.1
TC HRGMv2_1814_8 HRGMv2_1814_8_52 57580 58368 + 2.C.1.2.1
pfam HRGMv2_1814_8 HRGMv2_1814_8_53 59405 60448 + NadA
TC HRGMv2_1814_8 HRGMv2_1814_8_54 60473 61192 + 4.B.1.1.1
TC HRGMv2_1814_8 HRGMv2_1814_8_55 61189 62130 - 2.A.4.1.4
pfam HRGMv2_1814_8 HRGMv2_1814_8_56 62243 62617 - YbgS
pfam HRGMv2_1814_8 HRGMv2_1814_8_57 62933 63985 + DAHP_synth_1
TC HRGMv2_1814_8 HRGMv2_1814_8_58 64169 66337 + 1.B.14.1.15
STP HRGMv2_1814_8 HRGMv2_1814_8_59 66349 67335 + Peripla_BP_2
TC HRGMv2_1814_8 HRGMv2_1814_8_60 67356 68414 + 3.A.1.14.21
TC HRGMv2_1814_8 HRGMv2_1814_8_61 68411 69187 + 3.A.1.14.7
Gene ID: HRGMv2_1814_8_40
Type: TC
Location: 44235 - 46151 (+)
Gene ID: HRGMv2_1814_8_41
Type: CAZyme
Location: 46173 - 48806 (+)
Gene ID: HRGMv2_1814_8_42
Type: TC
Location: 49489 - 51057 (+)
Gene ID: HRGMv2_1814_8_43
Type: TC
Location: 51073 - 52212 (+)
Gene ID: HRGMv2_1814_8_44
Type: TC
Location: 52227 - 52340 (+)
Gene ID: HRGMv2_1814_8_45
Type: TC
Location: 52340 - 52633 (+)
Gene ID: HRGMv2_1814_8_46
Type: pfam
Location: 52783 - 53181 (+)
Gene ID: HRGMv2_1814_8_47
Type: TC
Location: 53178 - 53870 (+)
Gene ID: HRGMv2_1814_8_48
Type: TC
Location: 53874 - 54302 (+)
Gene ID: HRGMv2_1814_8_49
Type: TC
Location: 54366 - 55592 (+)
Gene ID: HRGMv2_1814_8_50
Type: TC
Location: 55725 - 57017 (+)
Gene ID: HRGMv2_1814_8_51
Type: TC
Location: 57052 - 57570 (+)
Gene ID: HRGMv2_1814_8_52
Type: TC
Location: 57580 - 58368 (+)
Gene ID: HRGMv2_1814_8_53
Type: pfam
Location: 59405 - 60448 (+)
Gene ID: HRGMv2_1814_8_54
Type: TC
Location: 60473 - 61192 (+)
Gene ID: HRGMv2_1814_8_55
Type: TC
Location: 61189 - 62130 (-)
Gene ID: HRGMv2_1814_8_56
Type: pfam
Location: 62243 - 62617 (-)
Gene ID: HRGMv2_1814_8_57
Type: pfam
Location: 62933 - 63985 (+)
Gene ID: HRGMv2_1814_8_58
Type: TC
Location: 64169 - 66337 (+)
Gene ID: HRGMv2_1814_8_59
Type: STP
Location: 66349 - 67335 (+)
Gene ID: HRGMv2_1814_8_60
Type: TC
Location: 67356 - 68414 (+)
Gene ID: HRGMv2_1814_8_61
Type: TC
Location: 68411 - 69187 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1814_8_53 vegetarian > omnivore 1.51394 0.01581

🧭 Explore Read Mapping of CGC

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