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Cluster: HRGMv2_1814_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1814_11 HRGMv2_1814_11_17 16518 17951 + 4.A.2.1.17
CAZyme HRGMv2_1814_11 HRGMv2_1814_11_18 18151 19863 + GH37
STP HRGMv2_1814_11 HRGMv2_1814_11_19 20067 21089 + Peripla_BP_2
TC HRGMv2_1814_11 HRGMv2_1814_11_20 21089 22075 + 3.A.1.14.11
TC HRGMv2_1814_11 HRGMv2_1814_11_21 22072 22830 + 3.A.1.14.11
pfam HRGMv2_1814_11 HRGMv2_1814_11_22 22840 23652 + Methyltransf_11 | Methyltransf_12 | Methyltransf_25 | Methyltransf_31
pfam HRGMv2_1814_11 HRGMv2_1814_11_23 23649 24506 + QRPTase_C | QRPTase_N
TC HRGMv2_1814_11 HRGMv2_1814_11_24 24530 26500 + 1.B.14.4.3
TC HRGMv2_1814_11 HRGMv2_1814_11_25 26556 27806 - 1.B.14.1.2
TC HRGMv2_1814_11 HRGMv2_1814_11_26 27966 28670 - 1.B.14.1.2
TC HRGMv2_1814_11 HRGMv2_1814_11_27 28947 29201 - 1.E.43.1.1
pfam HRGMv2_1814_11 HRGMv2_1814_11_28 29405 30139 + PilZ | PilZN
CAZyme HRGMv2_1814_11 HRGMv2_1814_11_29 30152 30763 - GH23
peptidase HRGMv2_1814_11 HRGMv2_1814_11_30 30864 31778 + S66.002
TC HRGMv2_1814_11 HRGMv2_1814_11_31 31875 33608 + 2.A.36.6.11
Gene ID: HRGMv2_1814_11_17
Type: TC
Location: 16518 - 17951 (+)
Gene ID: HRGMv2_1814_11_18
Type: CAZyme
Location: 18151 - 19863 (+)
Gene ID: HRGMv2_1814_11_19
Type: STP
Location: 20067 - 21089 (+)
Gene ID: HRGMv2_1814_11_20
Type: TC
Location: 21089 - 22075 (+)
Gene ID: HRGMv2_1814_11_21
Type: TC
Location: 22072 - 22830 (+)
Gene ID: HRGMv2_1814_11_22
Type: pfam
Location: 22840 - 23652 (+)
Gene ID: HRGMv2_1814_11_23
Type: pfam
Location: 23649 - 24506 (+)
Gene ID: HRGMv2_1814_11_24
Type: TC
Location: 24530 - 26500 (+)
Gene ID: HRGMv2_1814_11_25
Type: TC
Location: 26556 - 27806 (-)
Gene ID: HRGMv2_1814_11_26
Type: TC
Location: 27966 - 28670 (-)
Gene ID: HRGMv2_1814_11_27
Type: TC
Location: 28947 - 29201 (-)
Gene ID: HRGMv2_1814_11_28
Type: pfam
Location: 29405 - 30139 (+)
Gene ID: HRGMv2_1814_11_29
Type: CAZyme
Location: 30152 - 30763 (-)
Gene ID: HRGMv2_1814_11_30
Type: peptidase
Location: 30864 - 31778 (+)
Gene ID: HRGMv2_1814_11_31
Type: TC
Location: 31875 - 33608 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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