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Cluster: HRGMv2_1814_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1814_22 HRGMv2_1814_22_181 192763 193236 + 3.D.1.9.1
STP HRGMv2_1814_22 HRGMv2_1814_22_182 193272 194564 - Aminotran_1_2
CAZyme HRGMv2_1814_22 HRGMv2_1814_22_183 194698 196728 - GH13_19
CAZyme HRGMv2_1814_22 HRGMv2_1814_22_184 197045 197869 + GH73
TF HRGMv2_1814_22 HRGMv2_1814_22_185 197964 199142 - HTH_AraC | HTH_AraC
TC HRGMv2_1814_22 HRGMv2_1814_22_186 199225 200406 - 3.A.1.2.4
TC HRGMv2_1814_22 HRGMv2_1814_22_187 200384 201925 - 3.A.1.2.4
TC HRGMv2_1814_22 HRGMv2_1814_22_188 202003 202995 - 3.A.1.2.4
Gene ID: HRGMv2_1814_22_181
Type: TC
Location: 192763 - 193236 (+)
Gene ID: HRGMv2_1814_22_182
Type: STP
Location: 193272 - 194564 (-)
Gene ID: HRGMv2_1814_22_183
Type: CAZyme
Location: 194698 - 196728 (-)
Gene ID: HRGMv2_1814_22_184
Type: CAZyme
Location: 197045 - 197869 (+)
Gene ID: HRGMv2_1814_22_185
Type: TF
Location: 197964 - 199142 (-)
Gene ID: HRGMv2_1814_22_186
Type: TC
Location: 199225 - 200406 (-)
Gene ID: HRGMv2_1814_22_187
Type: TC
Location: 200384 - 201925 (-)
Gene ID: HRGMv2_1814_22_188
Type: TC
Location: 202003 - 202995 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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