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Cluster: HRGMv2_1814_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1814_26 HRGMv2_1814_26_143 145397 147283 + 4.C.1.1.6
CAZyme HRGMv2_1814_26 HRGMv2_1814_26_144 147380 150457 - GH2
TF HRGMv2_1814_26 HRGMv2_1814_26_145 150579 151661 - LacI
pfam HRGMv2_1814_26 HRGMv2_1814_26_146 152083 153015 + S-methyl_trans
TC HRGMv2_1814_26 HRGMv2_1814_26_147 153093 154139 - 3.A.1.20.2
TC HRGMv2_1814_26 HRGMv2_1814_26_148 154151 156229 - 3.A.1.20.2
TC HRGMv2_1814_26 HRGMv2_1814_26_149 156298 157329 - 3.A.1.20.2
TC HRGMv2_1814_26 HRGMv2_1814_26_150 157326 158630 - 2.A.1.4.4
STP HRGMv2_1814_26 HRGMv2_1814_26_151 158716 160257 - HATPase_c | MASE1
TF HRGMv2_1814_26 HRGMv2_1814_26_152 160257 160886 - GerE
TC HRGMv2_1814_26 HRGMv2_1814_26_153 161230 162192 + 3.A.1.17.1
TC HRGMv2_1814_26 HRGMv2_1814_26_154 162203 162970 + 3.A.1.17.1
TC HRGMv2_1814_26 HRGMv2_1814_26_155 162967 163794 + 3.A.1.17.1
Gene ID: HRGMv2_1814_26_143
Type: TC
Location: 145397 - 147283 (+)
Gene ID: HRGMv2_1814_26_144
Type: CAZyme
Location: 147380 - 150457 (-)
Gene ID: HRGMv2_1814_26_145
Type: TF
Location: 150579 - 151661 (-)
Gene ID: HRGMv2_1814_26_146
Type: pfam
Location: 152083 - 153015 (+)
Gene ID: HRGMv2_1814_26_147
Type: TC
Location: 153093 - 154139 (-)
Gene ID: HRGMv2_1814_26_148
Type: TC
Location: 154151 - 156229 (-)
Gene ID: HRGMv2_1814_26_149
Type: TC
Location: 156298 - 157329 (-)
Gene ID: HRGMv2_1814_26_150
Type: TC
Location: 157326 - 158630 (-)
Gene ID: HRGMv2_1814_26_151
Type: STP
Location: 158716 - 160257 (-)
Gene ID: HRGMv2_1814_26_152
Type: TF
Location: 160257 - 160886 (-)
Gene ID: HRGMv2_1814_26_153
Type: TC
Location: 161230 - 162192 (+)
Gene ID: HRGMv2_1814_26_154
Type: TC
Location: 162203 - 162970 (+)
Gene ID: HRGMv2_1814_26_155
Type: TC
Location: 162967 - 163794 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1814_26_147 vegetarian > omnivore 1.95098 0.01581
HRGMv2_1814_26_149 vegetarian > omnivore 2.21083 0.01581
HRGMv2_1814_26_154 vegetarian > omnivore 1.01612 0.04896

🧭 Explore Read Mapping of CGC

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