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Cluster: HRGMv2_1814_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1814_16 HRGMv2_1814_16_240 281529 281876 - 8.A.2.1.3
CAZyme HRGMv2_1814_16 HRGMv2_1814_16_241 282044 283594 + AA1
pfam HRGMv2_1814_16 HRGMv2_1814_16_242 283798 286188 - PQQ | PQQ | PQQ | PQQ | PQQ | PQQ | PQQ_2
STP HRGMv2_1814_16 HRGMv2_1814_16_243 286394 286930 + Pribosyltran
TC HRGMv2_1814_16 HRGMv2_1814_16_244 287017 287679 - 2.A.53.3.8
TC HRGMv2_1814_16 HRGMv2_1814_16_245 287912 288838 + 3.A.1.105.17
TC HRGMv2_1814_16 HRGMv2_1814_16_246 288838 289605 + 3.A.1.105.17
Gene ID: HRGMv2_1814_16_240
Type: TC
Location: 281529 - 281876 (-)
Gene ID: HRGMv2_1814_16_241
Type: CAZyme
Location: 282044 - 283594 (+)
Gene ID: HRGMv2_1814_16_242
Type: pfam
Location: 283798 - 286188 (-)
Gene ID: HRGMv2_1814_16_243
Type: STP
Location: 286394 - 286930 (+)
Gene ID: HRGMv2_1814_16_244
Type: TC
Location: 287017 - 287679 (-)
Gene ID: HRGMv2_1814_16_245
Type: TC
Location: 287912 - 288838 (+)
Gene ID: HRGMv2_1814_16_246
Type: TC
Location: 288838 - 289605 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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