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Cluster: HRGMv2_1814_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1814_21 HRGMv2_1814_21_314 367383 368480 - 3.A.1.6.1
TC HRGMv2_1814_21 HRGMv2_1814_21_315 368470 369345 - 3.A.1.6.1
TC HRGMv2_1814_21 HRGMv2_1814_21_316 369345 370178 - 3.A.1.6.1
TC HRGMv2_1814_21 HRGMv2_1814_21_317 370178 371194 - 3.A.1.6.1
CAZyme HRGMv2_1814_21 HRGMv2_1814_21_318 371472 372911 - GH1
TC HRGMv2_1814_21 HRGMv2_1814_21_319 372937 374610 - 1.B.3.1.3
TC HRGMv2_1814_21 HRGMv2_1814_21_320 374671 374982 - 4.A.3.2.9
TC HRGMv2_1814_21 HRGMv2_1814_21_321 375021 376340 - 4.A.3.2.7
TC HRGMv2_1814_21 HRGMv2_1814_21_322 376485 376796 - 4.A.3.2.9
Gene ID: HRGMv2_1814_21_314
Type: TC
Location: 367383 - 368480 (-)
Gene ID: HRGMv2_1814_21_315
Type: TC
Location: 368470 - 369345 (-)
Gene ID: HRGMv2_1814_21_316
Type: TC
Location: 369345 - 370178 (-)
Gene ID: HRGMv2_1814_21_317
Type: TC
Location: 370178 - 371194 (-)
Gene ID: HRGMv2_1814_21_318
Type: CAZyme
Location: 371472 - 372911 (-)
Gene ID: HRGMv2_1814_21_319
Type: TC
Location: 372937 - 374610 (-)
Gene ID: HRGMv2_1814_21_320
Type: TC
Location: 374671 - 374982 (-)
Gene ID: HRGMv2_1814_21_321
Type: TC
Location: 375021 - 376340 (-)
Gene ID: HRGMv2_1814_21_322
Type: TC
Location: 376485 - 376796 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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