Cluster: HRGMv2_1814_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1814
- CGC Family ID: CGCFAM_09865
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1814_3 | HRGMv2_1814_3_141 | 156384 | 157640 | + | 2.A.1.14.2 |
| TC | HRGMv2_1814_3 | HRGMv2_1814_3_142 | 157670 | 158368 | + | 1.B.35.2.1 |
| CAZyme | HRGMv2_1814_3 | HRGMv2_1814_3_143 | 158383 | 159606 | + | PL38 |
| CAZyme | HRGMv2_1814_3 | HRGMv2_1814_3_144 | 159618 | 161561 | + | PL17_1 |
Gene ID: HRGMv2_1814_3_141
Type: TC
Location: 156384 - 157640 (+)
Type: TC
Location: 156384 - 157640 (+)
Gene ID: HRGMv2_1814_3_142
Type: TC
Location: 157670 - 158368 (+)
Type: TC
Location: 157670 - 158368 (+)
Gene ID: HRGMv2_1814_3_143
Type: CAZyme
Location: 158383 - 159606 (+)
Type: CAZyme
Location: 158383 - 159606 (+)
Gene ID: HRGMv2_1814_3_144
Type: CAZyme
Location: 159618 - 161561 (+)
Type: CAZyme
Location: 159618 - 161561 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_B
Species
Citrobacter_B koseri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.