CGCs
Total: 123241 Gene Clusters| Cluster ID ↑ | CGC Family | Total Gene Count | CAZyme Gene Count | Substrate | CAZymes | Continent |
|---|---|---|---|---|---|---|
| RavehSadkaT_2016_SRR6257474_bin.5_CGC18 | CGCFAM_01490 | 14 | 3 | beta-mannan |
GH36
Alpha-galactoside (galactose oligosaccharides, galactomannans and galactolipid), Acetylgalactosamine (human blood group a and b, mucin glycoproteins), Raffinose/stachyose oligosaccharides (plant seeds), Raffinose oligosaccharides
CBM23
Mannan
CBM27
Mannan
GH26
Beta-glucan, Beta-mannan (plant), Xylan, Beta(1, 3)-xylan (algae)
|
North America |
| RavehSadkaT_2016_SRR6257474_bin.5_CGC19 | — | 15 | 7 | — |
GH1
Strictosidine (monoterpene indole alkaloids), Beta-fucosides, Beta-galactoside, 6-phospho-beta-galactoside, Beta-glucan, Beta-glucoside, 6-phospho-beta-glucoside, Ceramide b-galactosidase, Beta-glucuronoside, Beta-mannoside, Glc-conjugated aba (plant), Raucaffricine (glucoalkaloid), Lactose in milk, phlorizin (polyphenols) in fruit, Rutin (polyphenol), Amygdalin (cyanogenic glycosides), Prunasin (cyanogenic glycosides), Vicianin (cyanogenic glycosides), Glucosinolates (sulfur-containing phytochemicals), Beta-primeverosides (tea plant phytochemicals), Daidzin and genistin, furcatin (polyphenol), Dimboa glucoside (polyphenol), Furostanol (polyphenol), Phlorizin (polyphenols) in fruit, Isoflavone, Rutin, beta-xyloside
GH130
Mannooligosaccharides, Beta-mannan
CBM35
Xylan, Decorated soluble mannan and mannooligosaccharide, Beta-galactan
CE17
Acetylmannan
CE2
Acetylxylan
GT28
CE4
Chitooligosaccharides, Chitin, Peptidoglycan, Acetylxylan
|
North America |
| RavehSadkaT_2016_SRR6257474_bin.5_CGC2 | — | 5 | 1 | — |
GH3
Arabinan, arabinoxylan, Avenacin, Beta-1, 3-1, 4-glucan (laminarin, lichenin and cereal d-glucans), Beta-glucan, 3-glucan (laminarin, Cellodextrin (beta-1, 3-glucan), Chitin, peptidoglycan, Glycosphingolipid (host glycan), Peptidoglycan, Coniferin (glucoside of coniferyl alcohol), Protodioscin (plant steroidal saponin), Xylan, Xyloglucan (plant)
|
North America |
| RavehSadkaT_2016_SRR6257474_bin.5_CGC20 | — | 25 | 2 | — |
CBM32
Galactose, lactose, lacnac
GH84
Cleave beta-o-linked glcnac of host glycan, Hyaluronan, Mucin
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
|
North America |
| RavehSadkaT_2016_SRR6257474_bin.5_CGC21 | — | 4 | 1 | — |
CBM32
Galactose, lactose, lacnac
GH84
Cleave beta-o-linked glcnac of host glycan, Hyaluronan, Mucin
|
North America |
| RavehSadkaT_2016_SRR6257474_bin.5_CGC22 | CGCFAM_00020 | 5 | 2 | host glycan beta-glucan |
GH1
Strictosidine (monoterpene indole alkaloids), Beta-fucosides, Beta-galactoside, 6-phospho-beta-galactoside, Beta-glucan, Beta-glucoside, 6-phospho-beta-glucoside, Ceramide b-galactosidase, Beta-glucuronoside, Beta-mannoside, Glc-conjugated aba (plant), Raucaffricine (glucoalkaloid), Lactose in milk, phlorizin (polyphenols) in fruit, Rutin (polyphenol), Amygdalin (cyanogenic glycosides), Prunasin (cyanogenic glycosides), Vicianin (cyanogenic glycosides), Glucosinolates (sulfur-containing phytochemicals), Beta-primeverosides (tea plant phytochemicals), Daidzin and genistin, furcatin (polyphenol), Dimboa glucoside (polyphenol), Furostanol (polyphenol), Phlorizin (polyphenols) in fruit, Isoflavone, Rutin, beta-xyloside
|
North America |
| RavehSadkaT_2016_SRR6257474_bin.5_CGC24 | — | 4 | 1 | — |
CE4
Chitooligosaccharides, Chitin, Peptidoglycan, Acetylxylan
|
North America |
| RavehSadkaT_2016_SRR6257474_bin.5_CGC25 | CGCFAM_03703 | 5 | 2 | — |
CBM34
Granular starch
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
GH123
Glycosphingolipid (host glycan)
|
North America |
| RavehSadkaT_2016_SRR6257474_bin.5_CGC26 | — | 15 | 5 | — |
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
GH32
Levan (fructan), Graminan- and levan-type fructans, Fructan(inulin, levan and sucrose), Fructan, Inulin
GH1
Strictosidine (monoterpene indole alkaloids), Beta-fucosides, Beta-galactoside, 6-phospho-beta-galactoside, Beta-glucan, Beta-glucoside, 6-phospho-beta-glucoside, Ceramide b-galactosidase, Beta-glucuronoside, Beta-mannoside, Glc-conjugated aba (plant), Raucaffricine (glucoalkaloid), Lactose in milk, phlorizin (polyphenols) in fruit, Rutin (polyphenol), Amygdalin (cyanogenic glycosides), Prunasin (cyanogenic glycosides), Vicianin (cyanogenic glycosides), Glucosinolates (sulfur-containing phytochemicals), Beta-primeverosides (tea plant phytochemicals), Daidzin and genistin, furcatin (polyphenol), Dimboa glucoside (polyphenol), Furostanol (polyphenol), Phlorizin (polyphenols) in fruit, Isoflavone, Rutin, beta-xyloside
GH3
Arabinan, arabinoxylan, Avenacin, Beta-1, 3-1, 4-glucan (laminarin, lichenin and cereal d-glucans), Beta-glucan, 3-glucan (laminarin, Cellodextrin (beta-1, 3-glucan), Chitin, peptidoglycan, Glycosphingolipid (host glycan), Peptidoglycan, Coniferin (glucoside of coniferyl alcohol), Protodioscin (plant steroidal saponin), Xylan, Xyloglucan (plant)
|
North America |
| RavehSadkaT_2016_SRR6257474_bin.5_CGC28 | — | 4 | 1 | — |
GH23
Chitin, Peptidoglycan
|
North America |
| RavehSadkaT_2016_SRR6257474_bin.5_CGC29 | CGCFAM_01057 | 8 | 4 | — |
GT26
GT4
CE4
Chitooligosaccharides, Chitin, Peptidoglycan, Acetylxylan
|
North America |
| RavehSadkaT_2016_SRR6257474_bin.5_CGC3 | — | 23 | 5 | — |
GH4
Beta-glucoside (sinigrin, cellubiose), Isomaltulose (palatinose, from honey and sugar cane), Galacturonides (polygalacturonan of pectin), Alpha-galactoside (raffinose family of oligosaccharides), Maltose and other small maltooligosaccharides, Sucrose and its isomeric disaccharides, Alpha-glucuronide in glucuronoxylan
GH84
Cleave beta-o-linked glcnac of host glycan, Hyaluronan, Mucin
GH125
Alpha-mannan, plant n-glycan
GH38
Mannosyl-oligosaccharide
CBM32
Galactose, lactose, lacnac
GH85
Mannosyl-oligosaccharide
|
North America |
| RavehSadkaT_2016_SRR6257474_bin.5_CGC30 | CGCFAM_04139 | 9 | 5 | — |
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
GH125
Alpha-mannan, plant n-glycan
GH36
Alpha-galactoside (galactose oligosaccharides, galactomannans and galactolipid), Acetylgalactosamine (human blood group a and b, mucin glycoproteins), Raffinose/stachyose oligosaccharides (plant seeds), Raffinose oligosaccharides
|
North America |
| RavehSadkaT_2016_SRR6257474_bin.5_CGC32 | — | 8 | 1 | — |
GH77
Amylomaltase
|
North America |
| RavehSadkaT_2016_SRR6257474_bin.5_CGC33 | — | 8 | 1 | — |
CE4
Chitooligosaccharides, Chitin, Peptidoglycan, Acetylxylan
|
North America |
| RavehSadkaT_2016_SRR6257474_bin.5_CGC35 | CGCFAM_01807 | 6 | 1 | — |
GH36
Alpha-galactoside (galactose oligosaccharides, galactomannans and galactolipid), Acetylgalactosamine (human blood group a and b, mucin glycoproteins), Raffinose/stachyose oligosaccharides (plant seeds), Raffinose oligosaccharides
|
North America |
| RavehSadkaT_2016_SRR6257474_bin.5_CGC36 | — | 4 | 1 | — |
GH1
Strictosidine (monoterpene indole alkaloids), Beta-fucosides, Beta-galactoside, 6-phospho-beta-galactoside, Beta-glucan, Beta-glucoside, 6-phospho-beta-glucoside, Ceramide b-galactosidase, Beta-glucuronoside, Beta-mannoside, Glc-conjugated aba (plant), Raucaffricine (glucoalkaloid), Lactose in milk, phlorizin (polyphenols) in fruit, Rutin (polyphenol), Amygdalin (cyanogenic glycosides), Prunasin (cyanogenic glycosides), Vicianin (cyanogenic glycosides), Glucosinolates (sulfur-containing phytochemicals), Beta-primeverosides (tea plant phytochemicals), Daidzin and genistin, furcatin (polyphenol), Dimboa glucoside (polyphenol), Furostanol (polyphenol), Phlorizin (polyphenols) in fruit, Isoflavone, Rutin, beta-xyloside
|
North America |
| RavehSadkaT_2016_SRR6257474_bin.5_CGC37 | — | 10 | 1 | — |
GH32
Levan (fructan), Graminan- and levan-type fructans, Fructan(inulin, levan and sucrose), Fructan, Inulin
|
North America |
| RavehSadkaT_2016_SRR6257474_bin.5_CGC38 | — | 3 | 1 | — |
GH23
Chitin, Peptidoglycan
|
North America |
| RavehSadkaT_2016_SRR6257474_bin.5_CGC39 | — | 5 | 1 | — |
AA4
Lignin
|
North America |