Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC36
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2016_SRR6257474_bin.5
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_3491 | RavehSadkaT_2016_SRR6257474_bin.5_k119_3491_7 | 7882 | 8742 | - | 8.A.5.1.4 |
| TF | RavehSadkaT_2016_SRR6257474_bin.5_k119_3491 | RavehSadkaT_2016_SRR6257474_bin.5_k119_3491_8 | 8852 | 9250 | + | MerR |
| TF | RavehSadkaT_2016_SRR6257474_bin.5_k119_3491 | RavehSadkaT_2016_SRR6257474_bin.5_k119_3491_9 | 9357 | 10094 | + | HTH_DeoR |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_3491 | RavehSadkaT_2016_SRR6257474_bin.5_k119_3491_10 | 10314 | 11768 | + | GH1 |
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_3491_7
Type: TC
Location: 7882 - 8742 (-)
Type: TC
Location: 7882 - 8742 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_3491_8
Type: TF
Location: 8852 - 9250 (+)
Type: TF
Location: 8852 - 9250 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_3491_9
Type: TF
Location: 9357 - 10094 (+)
Type: TF
Location: 9357 - 10094 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_3491_10
Type: CAZyme
Location: 10314 - 11768 (+)
Type: CAZyme
Location: 10314 - 11768 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900547475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.