Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC25

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	RavehSadkaT_2016_SRR6257474_bin.5_k119_1944	RavehSadkaT_2016_SRR6257474_bin.5_k119_1944_57	71737	73467	-	CBM34 \| GH13_20
TF	RavehSadkaT_2016_SRR6257474_bin.5_k119_1944	RavehSadkaT_2016_SRR6257474_bin.5_k119_1944_58	73595	74266	+	HTH_AraC \| HTH_AraC
TC	RavehSadkaT_2016_SRR6257474_bin.5_k119_1944	RavehSadkaT_2016_SRR6257474_bin.5_k119_1944_59	74815	76293	-	3.A.18.1.1
STP	RavehSadkaT_2016_SRR6257474_bin.5_k119_1944	RavehSadkaT_2016_SRR6257474_bin.5_k119_1944_60	76441	77118	-	NIR_SIR \| NIR_SIR_ferr
CAZyme	RavehSadkaT_2016_SRR6257474_bin.5_k119_1944	RavehSadkaT_2016_SRR6257474_bin.5_k119_1944_61	77381	83446	-	GH123

Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1944_57
Type: CAZyme
Location: 71737 - 73467 (-)

Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1944_58
Type: TF
Location: 73595 - 74266 (+)

Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1944_59
Type: TC
Location: 74815 - 76293 (-)

Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1944_60
Type: STP
Location: 76441 - 77118 (-)

Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1944_61
Type: CAZyme
Location: 77381 - 83446 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.