Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: host glycan/beta-glucan
- Genome ID: RavehSadkaT_2016_SRR6257474_bin.5
- CGC Family ID: CGCFAM_00020
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_1771 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1771_4 | 2846 | 4252 | + | GH1 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_1771 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1771_5 | 4303 | 6153 | + | 4.A.1.2.11 |
| pfam | RavehSadkaT_2016_SRR6257474_bin.5_k119_1771 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1771_6 | 6520 | 7353 | + | PRD | PRD | CAT_RBD |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_1771 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1771_7 | 7522 | 9390 | + | 4.A.1.2.11 |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_1771 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1771_8 | 9406 | 10821 | + | GH1 |
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1771_4
Type: CAZyme
Location: 2846 - 4252 (+)
Type: CAZyme
Location: 2846 - 4252 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1771_5
Type: TC
Location: 4303 - 6153 (+)
Type: TC
Location: 4303 - 6153 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1771_6
Type: pfam
Location: 6520 - 7353 (+)
Type: pfam
Location: 6520 - 7353 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1771_7
Type: TC
Location: 7522 - 9390 (+)
Type: TC
Location: 7522 - 9390 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1771_8
Type: CAZyme
Location: 9406 - 10821 (+)
Type: CAZyme
Location: 9406 - 10821 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900547475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.