Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC39
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2016_SRR6257474_bin.5
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_3652 | RavehSadkaT_2016_SRR6257474_bin.5_k119_3652_99 | 98228 | 99631 | - | AA4 |
| pfam | RavehSadkaT_2016_SRR6257474_bin.5_k119_3652 | RavehSadkaT_2016_SRR6257474_bin.5_k119_3652_100 | 99677 | 100897 | - | ETF_alpha | ETF |
| pfam | RavehSadkaT_2016_SRR6257474_bin.5_k119_3652 | RavehSadkaT_2016_SRR6257474_bin.5_k119_3652_101 | 100911 | 101699 | - | ETF |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_3652 | RavehSadkaT_2016_SRR6257474_bin.5_k119_3652_102 | 101879 | 102580 | - | 2.A.122.1.4 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_3652 | RavehSadkaT_2016_SRR6257474_bin.5_k119_3652_103 | 102582 | 102989 | - | 1.E.14.1.5 |
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_3652_99
Type: CAZyme
Location: 98228 - 99631 (-)
Type: CAZyme
Location: 98228 - 99631 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_3652_100
Type: pfam
Location: 99677 - 100897 (-)
Type: pfam
Location: 99677 - 100897 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_3652_101
Type: pfam
Location: 100911 - 101699 (-)
Type: pfam
Location: 100911 - 101699 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_3652_102
Type: TC
Location: 101879 - 102580 (-)
Type: TC
Location: 101879 - 102580 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_3652_103
Type: TC
Location: 102582 - 102989 (-)
Type: TC
Location: 102582 - 102989 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900547475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.