Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC29
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: RavehSadkaT_2016_SRR6257474_bin.5
- CGC Family ID: CGCFAM_01057
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_146 | 157820 | 158557 | + | GT26 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_147 | 158557 | 160092 | + | 2.A.66.4.7 |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_148 | 160102 | 161382 | + | GT4 |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_149 | 161388 | 162533 | + | GT4 |
| pfam | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_150 | 162546 | 163178 | + | FTCD_C |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_151 | 163270 | 164070 | - | CE4 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_152 | 164550 | 166280 | + | 3.A.1.106.3 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_153 | 166282 | 168066 | + | 3.A.1.106.3 |
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_146
Type: CAZyme
Location: 157820 - 158557 (+)
Type: CAZyme
Location: 157820 - 158557 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_147
Type: TC
Location: 158557 - 160092 (+)
Type: TC
Location: 158557 - 160092 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_148
Type: CAZyme
Location: 160102 - 161382 (+)
Type: CAZyme
Location: 160102 - 161382 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_149
Type: CAZyme
Location: 161388 - 162533 (+)
Type: CAZyme
Location: 161388 - 162533 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_150
Type: pfam
Location: 162546 - 163178 (+)
Type: pfam
Location: 162546 - 163178 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_151
Type: CAZyme
Location: 163270 - 164070 (-)
Type: CAZyme
Location: 163270 - 164070 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_152
Type: TC
Location: 164550 - 166280 (+)
Type: TC
Location: 164550 - 166280 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_153
Type: TC
Location: 166282 - 168066 (+)
Type: TC
Location: 166282 - 168066 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900547475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.