Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC33
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2016_SRR6257474_bin.5
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_2798 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2798_91 | 81744 | 82634 | + | CE4 |
| NULL(UNKNOWN) | RavehSadkaT_2016_SRR6257474_bin.5_k119_2798 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2798_92 | 82694 | 82999 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_2798 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2798_93 | 83019 | 84629 | - | 3.A.18.1.1 |
| pfam | RavehSadkaT_2016_SRR6257474_bin.5_k119_2798 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2798_94 | 85066 | 85785 | - | Acyltransferase |
| pfam | RavehSadkaT_2016_SRR6257474_bin.5_k119_2798 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2798_95 | 85942 | 86787 | + | Staygreen | DUF3888 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_2798 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2798_96 | 87244 | 88647 | + | 2.A.1.3.17 |
| pfam | RavehSadkaT_2016_SRR6257474_bin.5_k119_2798 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2798_97 | 88743 | 89603 | - | VCA0040-like |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_2798 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2798_98 | 89869 | 91113 | + | 9.A.40.2.1 |
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2798_91
Type: CAZyme
Location: 81744 - 82634 (+)
Type: CAZyme
Location: 81744 - 82634 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2798_92
Type:
Location: 82694 - 82999 (+)
Type:
Location: 82694 - 82999 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2798_93
Type: TC
Location: 83019 - 84629 (-)
Type: TC
Location: 83019 - 84629 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2798_94
Type: pfam
Location: 85066 - 85785 (-)
Type: pfam
Location: 85066 - 85785 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2798_95
Type: pfam
Location: 85942 - 86787 (+)
Type: pfam
Location: 85942 - 86787 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2798_96
Type: TC
Location: 87244 - 88647 (+)
Type: TC
Location: 87244 - 88647 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2798_97
Type: pfam
Location: 88743 - 89603 (-)
Type: pfam
Location: 88743 - 89603 (-)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2798_98
Type: TC
Location: 89869 - 91113 (+)
Type: TC
Location: 89869 - 91113 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900547475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.