Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2016_SRR6257474_bin.5
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_92 | 104078 | 105085 | + | GH23 |
| pfam | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_93 | 105102 | 106004 | + | TpcC |
| TF | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_94 | 106130 | 106504 | + | GntR |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387 | RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_95 | 106509 | 107363 | + | 3.A.1.149.1 |
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_92
Type: CAZyme
Location: 104078 - 105085 (+)
Type: CAZyme
Location: 104078 - 105085 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_93
Type: pfam
Location: 105102 - 106004 (+)
Type: pfam
Location: 105102 - 106004 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_94
Type: TF
Location: 106130 - 106504 (+)
Type: TF
Location: 106130 - 106504 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_2387_95
Type: TC
Location: 106509 - 107363 (+)
Type: TC
Location: 106509 - 107363 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900547475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.