Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2016_SRR6257474_bin.5
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_1571 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1571_23 | 25563 | 26453 | + | 3.A.1.14.17 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_1571 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1571_24 | 26456 | 27448 | + | 3.A.1.14.10 |
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_1571 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1571_25 | 27448 | 28230 | + | 3.A.1.14.7 |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_1571 | RavehSadkaT_2016_SRR6257474_bin.5_k119_1571_26 | 28481 | 33742 | + | CBM32 | GH84 |
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1571_23
Type: TC
Location: 25563 - 26453 (+)
Type: TC
Location: 25563 - 26453 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1571_24
Type: TC
Location: 26456 - 27448 (+)
Type: TC
Location: 26456 - 27448 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1571_25
Type: TC
Location: 27448 - 28230 (+)
Type: TC
Location: 27448 - 28230 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_1571_26
Type: CAZyme
Location: 28481 - 33742 (+)
Type: CAZyme
Location: 28481 - 33742 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900547475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.