Cluster: RavehSadkaT_2016_SRR6257474_bin.5_CGC38
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: RavehSadkaT_2016_SRR6257474_bin.5
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RavehSadkaT_2016_SRR6257474_bin.5_k119_3544 | RavehSadkaT_2016_SRR6257474_bin.5_k119_3544_6 | 4054 | 5958 | + | 3.A.7.13.2 |
| NULL(UNKNOWN) | RavehSadkaT_2016_SRR6257474_bin.5_k119_3544 | RavehSadkaT_2016_SRR6257474_bin.5_k119_3544_7 | 5981 | 6574 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | RavehSadkaT_2016_SRR6257474_bin.5_k119_3544 | RavehSadkaT_2016_SRR6257474_bin.5_k119_3544_8 | 6585 | 7781 | + | GH23 |
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_3544_6
Type: TC
Location: 4054 - 5958 (+)
Type: TC
Location: 4054 - 5958 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_3544_7
Type:
Location: 5981 - 6574 (+)
Type:
Location: 5981 - 6574 (+)
Gene ID: RavehSadkaT_2016_SRR6257474_bin.5_k119_3544_8
Type: CAZyme
Location: 6585 - 7781 (+)
Type: CAZyme
Location: 6585 - 7781 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900547475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.