y
Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna16059.1-v1.0-hybrid |
Family | GH3 |
Protein Properties | Length: 779 Molecular Weight: 83768.2 Isoelectric Point: 6.6051 |
Chromosome | Chromosome/Scaffold: 5 Start: 14925851 End: 14929592 |
Description | beta-D-xylosidase 4 |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH3 | 91 | 340 | 0 |
SVSRLGIPKYEWWSEALHGVSYVGPGTRFSSVVPGATSFPQPILTAASFNNSLFEAIGRVVSTEARAMYNVGLAGLTYWSPNINIFRDPRWGRGQETPGE DPLLTSNYGSGYVRGLQQTDSEDKSRLKVAACCKHYTAYDLDNWKGVDRYTFNAVVTKQDMDDTFQPPFKSCVLDGNVASVMCSYNKVNGTPTCADPDLL SGVIRGEWKLNGYIVTDCDSIDVYYKNQHYTKTPEEAAAKGILAGVDLDC |
Full Sequence |
---|
Protein Sequence Length: 779 Download |
MSSSSSCSSV HNRAAPPKAL LCFCFALCYI LLCLCSVSSV SGQSFACGES GNASSFPFCD 60 KSLAADARVA DLVQRLTLQE KITFLVNSAG SVSRLGIPKY EWWSEALHGV SYVGPGTRFS 120 SVVPGATSFP QPILTAASFN NSLFEAIGRV VSTEARAMYN VGLAGLTYWS PNINIFRDPR 180 WGRGQETPGE DPLLTSNYGS GYVRGLQQTD SEDKSRLKVA ACCKHYTAYD LDNWKGVDRY 240 TFNAVVTKQD MDDTFQPPFK SCVLDGNVAS VMCSYNKVNG TPTCADPDLL SGVIRGEWKL 300 NGYIVTDCDS IDVYYKNQHY TKTPEEAAAK GILAGVDLDC GSFLGKYTEG AVKGGLVTEA 360 AIDKAITNNF GTLMRLGFFD GDPRKQPYGN LGPKDVCTAA NQELARETAR QGIVLLKNAP 420 GSLPLSPTAI KSLAVIGPNG NVTKTMIGNY EGNPCKYTTP LQGLTAVVPT TFVAGCPDVA 480 CGTAKVDDAT KLAAAADATV VIVGENQSIE TESHDRIDLY LPGQQTLLIT EVAKASKGPV 540 ILVIMSGGGF DITFAKNNDK ITSILWVGYP GEAGGAAIAD VIFGFYNPCG RLPMTWYPQA 600 YVDKVPMTNM NMRADPASGY PGRTYRFYTG DTVYAFGDGI SYSTFNHRLV RAPNQVSIPL 660 EEDHVCYSSS CQSLDVVEER CQNLAFDIHL GVKNMGKMCG SHTVLLYSSP PSVHNAPKKH 720 LLGFEKVFLS SQGEALVKFN VDVCKHLSVV DELGNRKVAL GDHVLHVGDL RQTLSVRI* 780 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 3.0e-48 | 64 | 468 | 456 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-52 | 413 | 644 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 5.0e-57 | 93 | 477 | 391 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-66 | 86 | 368 | 287 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PLN03080 | PLN03080 | 0 | 20 | 778 | 778 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 127 | 741 | 91 | 696 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
PDB | 3u48_A | 0 | 127 | 741 | 91 | 696 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
PDB | 3u4a_B | 0 | 127 | 741 | 91 | 696 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
PDB | 3u4a_A | 0 | 127 | 741 | 91 | 696 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
PDB | 4i3g_B | 1e-37 | 67 | 466 | 52 | 428 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |