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Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01017660001 |
Family | GH3 |
Protein Properties | Length: 747 Molecular Weight: 81181.2 Isoelectric Point: 4.9317 |
Chromosome | Chromosome/Scaffold: 5 Start: 2429184 End: 2432197 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 103 | 331 | 0 |
GVERIGLPKYNWWSEALHGVSNFGRCVFFDEVVPGATSFPTVILSAASFNQSLWKTLGQAVSTEARAMYNSGNAGLTFWSPNINVVRDPRWGRILETPGE DPHLVGLYAVNYHYAAYDLDNWKGADRVHFDARVSVQDMAETFVLPFEMCVKEGDVSSVMCSYNKINGIPSCADSRLLKQTIRGEWDLHGYIVSDCDSVE VMAVDQKWLDSSFSDSAAQALNAGMNLDC |
Full Sequence |
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Protein Sequence Length: 747 Download |
MGKLLRSLFF SLSIVWIAFF AVCSAIKSPL KDGPAAAPMA ARGPIDGNYT YVCDESRFAA 60 LGLDMKDFHY CDSSSPYEVR AKDLVDRMTL SEKVMQTGDQ ASGVERIGLP KYNWWSEALH 120 GVSNFGRCVF FDEVVPGATS FPTVILSAAS FNQSLWKTLG QAVSTEARAM YNSGNAGLTF 180 WSPNINVVRD PRWGRILETP GEDPHLVGLY AVNYHYAAYD LDNWKGADRV HFDARVSVQD 240 MAETFVLPFE MCVKEGDVSS VMCSYNKING IPSCADSRLL KQTIRGEWDL HGYIVSDCDS 300 VEVMAVDQKW LDSSFSDSAA QALNAGMNLD CGTFNNRSLT EAVNQGKANQ ADLDHSLRYL 360 YVLLMRVGFF DGIPAFASLG KDDICSAEHI ELAREAARQG IVLLKNDNAT LPLKSVKNIA 420 LVGPHANATD AMIGNYAGIP CYYVSPLDAF SSMGEVRYEK GCADVQCLNE TYIFNAMEAA 480 KRADATIIFA GTDLSIEAEA LDRVDLLLPG YQTQLINQVA DLSTGPVVLV IMSGGGVDIS 540 FARDNPKIAA ILWAGYPGEQ GGNAIADVIL GKYNPGGRLP ITWYEADYVD MLPMTSMALR 600 PVDSLGYPGR TYKFFNGSTV YPFGYGMSYT NFSYSLSTSQ SCKESIEFEV AVKNVGRMDG 660 SEVVVVYSSP PLGIAGTHIK KVVGFERVFV KVGGTEKVKF SMNVCKSLGI VDSTGYALLP 720 SGSHTIKVGG DNTTSVAFPF HVNYVN* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 4.0e-48 | 87 | 462 | 397 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 5.0e-52 | 100 | 358 | 276 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-62 | 401 | 630 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 5.0e-74 | 93 | 704 | 684 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 67 | 729 | 737 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI25988.1 | 0 | 1 | 746 | 1 | 774 | unnamed protein product [Vitis vinifera] |
EMBL | CBI25989.1 | 0 | 1 | 746 | 1 | 746 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274591.1 | 0 | 1 | 744 | 1 | 802 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274619.1 | 0 | 1 | 746 | 1 | 805 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274651.1 | 0 | 1 | 746 | 1 | 809 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 128 | 702 | 79 | 696 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3u48_A | 0 | 128 | 702 | 79 | 696 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3u4a_B | 0 | 128 | 702 | 79 | 696 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3u4a_A | 0 | 128 | 702 | 79 | 696 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 2x41_A | 9.00054e-42 | 132 | 729 | 72 | 699 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |