y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.009G282000.3 |
Family | GH3 |
Protein Properties | Length: 632 Molecular Weight: 69492 Isoelectric Point: 7.2243 |
Chromosome | Chromosome/Scaffold: 09 Start: 23864317 End: 23868461 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 8 | 187 | 0 |
NGMTFWAPNINIFRDPRWGRGQETPGEDPFVVGKYAVSYVRGVQGDTFQGGKLHGHLQASACCKHFTAYDLDNWKGTNRFLFDARVTVQDLADTYQPPFE KCVRDGRASGVMCAYNRVNGVPSCADSSLLFKTLRGEWDFKGYVTSDCDAVAIIHNDQGYAKAPEDAVVDVLKAGMDLNC |
Full Sequence |
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Protein Sequence Length: 632 Download |
MYNAGEANGM TFWAPNINIF RDPRWGRGQE TPGEDPFVVG KYAVSYVRGV QGDTFQGGKL 60 HGHLQASACC KHFTAYDLDN WKGTNRFLFD ARVTVQDLAD TYQPPFEKCV RDGRASGVMC 120 AYNRVNGVPS CADSSLLFKT LRGEWDFKGY VTSDCDAVAI IHNDQGYAKA PEDAVVDVLK 180 AGMDLNCGSY LQNYTKSAVL QKKLPESQVD RALHNLFAVR MRLGLFNGNP VPNPFGNIGM 240 DQICSPEHQI LALEAARNGI VLLKNDAKLL PLPKSTMSLA VIGPNANSPQ TLIGNYAGPP 300 CKSVTPLQAL ESYIKNTVYH PGCDTVSCST GAIDKAVDIA KRADYVVLIM GLDQTEEREA 360 LDRVDLFLPG RQQELIVSVA KAAKRPVVLV LLSGGPIDIS FAKDDPRIGG IFWAGYPGEG 420 GGNALAEVIF GDHNPGGRLP VTWYPQDFTK VPMTDMRMRP ESSLDYPGRT YRFYKGDTVF 480 EFGYGLSYSK YSYSFTRVSQ NNLYLNHSSS LHTKETSESV RYRLVSEVGA EICDERKITV 540 HVGVKNNGEL AGKHPVLLYV RHGNHGNGRP KKQLIGFRSV ILSGGEMGEI QFEVSPCEHL 600 SRANEYGLMV MEEGRHFLVV GDNKHPITII I* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 1.0e-44 | 13 | 289 | 281 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-53 | 13 | 212 | 203 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-62 | 260 | 482 | 233 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 6.0e-72 | 10 | 596 | 630 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 1 | 629 | 640 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_177929.1 | 0 | 1 | 629 | 138 | 765 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002285805.1 | 0 | 1 | 631 | 143 | 774 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302285.1 | 0 | 1 | 631 | 142 | 773 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306583.1 | 0 | 1 | 631 | 142 | 745 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513892.1 | 0 | 1 | 631 | 143 | 774 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 7 | 627 | 121 | 728 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3u48_A | 0 | 7 | 627 | 121 | 728 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3u4a_B | 0 | 7 | 627 | 121 | 728 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3u4a_A | 0 | 7 | 627 | 121 | 728 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 2x41_A | 2e-40 | 14 | 629 | 117 | 707 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO102267 | 302 | 81 | 382 | 0 |
CO125335 | 298 | 263 | 534 | 0 |
CO129502 | 267 | 166 | 432 | 0 |
ES815262 | 250 | 383 | 632 | 0 |
CO121302 | 256 | 184 | 439 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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